Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g008430.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | Solyc04g008430.1.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083896 | Potato | extracellular | 98.08 | 98.08 |
| Solyc03g121540.2.1 | Tomato | nucleus | 82.16 | 81.86 |
| Solyc06g062580.2.1 | Tomato | nucleus | 82.28 | 81.69 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 79.16 | 78.6 |
| KRH10007 | Soybean | nucleus | 78.44 | 77.98 |
| KRH23324 | Soybean | vacuole | 78.32 | 77.76 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 76.41 | 76.04 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 77.13 | 76.03 |
| CDX97513 | Canola | golgi, vacuole | 76.41 | 75.95 |
| KRH44153 | Soybean | nucleus | 76.41 | 75.68 |
| CDY23637 | Canola | golgi, vacuole | 75.93 | 75.57 |
| CDY51738 | Canola | golgi, vacuole | 75.81 | 75.45 |
| KRH47126 | Soybean | nucleus | 76.29 | 75.38 |
| CDY37486 | Canola | golgi, vacuole | 75.33 | 74.97 |
| Bra021506.1-P | Field mustard | vacuole | 75.81 | 73.52 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 62.4 | 71.37 |
| Solyc12g008840.1.1 | Tomato | extracellular | 61.68 | 71.13 |
| GSMUA_Achr6P35850_001 | Banana | golgi, vacuole | 69.46 | 70.39 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 61.56 | 70.03 |
| Os01t0580200-01 | Rice | golgi, vacuole | 69.22 | 69.89 |
| OQU87043 | Sorghum | golgi, vacuole | 68.98 | 69.65 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 61.32 | 69.57 |
| Zm00001d044290_P005 | Maize | golgi, vacuole | 69.1 | 69.52 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 61.08 | 69.29 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 60.36 | 68.85 |
| HORVU3Hr1G050450.12 | Barley | golgi, vacuole | 67.78 | 68.11 |
| TraesCS3A01G208600.1 | Wheat | plastid | 67.9 | 67.9 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 68.02 | 67.86 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 67.78 | 67.78 |
| Solyc01g110000.2.1 | Tomato | nucleus | 58.32 | 66.99 |
| EER88554 | Sorghum | golgi, vacuole | 57.01 | 65.66 |
| Zm00001d046357_P001 | Maize | extracellular | 56.77 | 65.65 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 56.41 | 65.6 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 56.05 | 65.45 |
| TraesCS7D01G359500.1 | Wheat | golgi | 55.93 | 65.13 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 55.93 | 65.04 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 56.29 | 64.92 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 55.93 | 64.41 |
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 55.81 | 64.28 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 38.44 | 64.2 |
| EES06516 | Sorghum | mitochondrion, plastid | 56.41 | 63.65 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 56.17 | 62.78 |
| Solyc04g080840.1.1 | Tomato | extracellular, golgi | 55.21 | 62.72 |
| HORVU6Hr1G039490.6 | Barley | plastid | 56.65 | 61.91 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 62.52 | 61.78 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 61.08 | 60.64 |
| Zm00001d053585_P002 | Maize | plastid | 55.33 | 55.73 |
| Solyc11g069270.1.1 | Tomato | extracellular | 54.97 | 53.87 |
| Solyc02g078950.2.1 | Tomato | vacuole | 51.98 | 51.42 |
| Solyc11g018500.1.1 | Tomato | cytosol, golgi, vacuole | 42.28 | 50.79 |
| Solyc03g019890.2.1 | Tomato | nucleus | 51.98 | 49.89 |
| Solyc11g018490.1.1 | Tomato | cytosol | 44.43 | 49.14 |
| Solyc07g042220.1.1 | Tomato | unclear | 46.83 | 47.8 |
| Solyc09g092160.2.1 | Tomato | extracellular | 50.54 | 47.31 |
| Solyc10g055470.1.1 | Tomato | vacuole | 43.95 | 44.27 |
| Solyc01g111540.2.1 | Tomato | unclear | 43.71 | 43.92 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EMBL:AF023847 | EMBL:AJ012797 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 | InterPro:Galactose-bd-like_sf |
| InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 |
| InterPro:Lectin_gal-bd_dom | UniProt:P48980 | PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF74 | UniProt:Q546T5 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc12g044880.1 | EnsemblPlants:Solyc12g044880.1.1 | UniParc:UPI0000000330 | EMBL:X83854 | SEG:seg |
Description
Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:Q546T5]
Coordinates
chr12:-:37635058..37641072
Molecular Weight (calculated)
93341.0 Da
IEP (calculated)
6.591
GRAVY (calculated)
-0.241
Length
835 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFWMAMLLM LLLCLWVSCG IASVSYDHKA IIVNGQRKIL ISGSIHYPRS TPEMWPDLIQ KAKEGGVDVI QTYVFWNGHE PEEGKYYFEE RYDLVKFIKV
101: VQEAGLYVHL RIGPYACAEW NFGGFPVWLK YVPGISFRTN NEPFKAAMQK FTTKIVDMMK AEKLYETQGG PIILSQIENE YGPMEWELGE PGKVYSEWAA
201: KMAVDLGTGV PWIMCKQDDV PDPIINTCNG FYCDYFTPNK ANKPKMWTEA WTAWFTEFGG PVPYRPAEDM AFAVARFIQT GGSFINYYMY HGGTNFGRTS
301: GGPFIATSYD YDAPLDEFGS LRQPKWGHLK DLHRAIKLCE PALVSVDPTV TSLGNYQEAR VFKSESGACA AFLANYNQHS FAKVAFGNMH YNLPPWSISI
401: LPDCKNTVYN TARVGAQSAQ MKMTPVSRGF SWESFNEDAA SHEDDTFTVV GLLEQINITR DVSDYLWYMT DIEIDPTEGF LNSGNWPWLT VFSAGHALHV
501: FVNGQLAGTV YGSLENPKLT FSNGINLRAG VNKISLLSIA VGLPNVGPHF ETWNAGVLGP VSLNGLNEGT RDLTWQKWFY KVGLKGEALS LHSLSGSPSV
601: EWVEGSLVAQ KQPLSWYKTT FNAPDGNEPL ALDMNTMGKG QVWINGQSLG RHWPAYKSSG SCSVCNYTGW FDEKKCLTNC GEGSQRWYHV PRSWLYPTGN
701: LLVVFEEWGG DPYGITLVKR EIGSVCADIY EWQPQLLNWQ RLVSGKFDRP LRPKAHLKCA PGQKISSIKF ASFGTPEGVC GNFQQGSCHA PRSYDAFKKN
801: CVGKESCSVQ VTPENFGGDP CRNVLKKLSV EAICS
101: VQEAGLYVHL RIGPYACAEW NFGGFPVWLK YVPGISFRTN NEPFKAAMQK FTTKIVDMMK AEKLYETQGG PIILSQIENE YGPMEWELGE PGKVYSEWAA
201: KMAVDLGTGV PWIMCKQDDV PDPIINTCNG FYCDYFTPNK ANKPKMWTEA WTAWFTEFGG PVPYRPAEDM AFAVARFIQT GGSFINYYMY HGGTNFGRTS
301: GGPFIATSYD YDAPLDEFGS LRQPKWGHLK DLHRAIKLCE PALVSVDPTV TSLGNYQEAR VFKSESGACA AFLANYNQHS FAKVAFGNMH YNLPPWSISI
401: LPDCKNTVYN TARVGAQSAQ MKMTPVSRGF SWESFNEDAA SHEDDTFTVV GLLEQINITR DVSDYLWYMT DIEIDPTEGF LNSGNWPWLT VFSAGHALHV
501: FVNGQLAGTV YGSLENPKLT FSNGINLRAG VNKISLLSIA VGLPNVGPHF ETWNAGVLGP VSLNGLNEGT RDLTWQKWFY KVGLKGEALS LHSLSGSPSV
601: EWVEGSLVAQ KQPLSWYKTT FNAPDGNEPL ALDMNTMGKG QVWINGQSLG RHWPAYKSSG SCSVCNYTGW FDEKKCLTNC GEGSQRWYHV PRSWLYPTGN
701: LLVVFEEWGG DPYGITLVKR EIGSVCADIY EWQPQLLNWQ RLVSGKFDRP LRPKAHLKCA PGQKISSIKF ASFGTPEGVC GNFQQGSCHA PRSYDAFKKN
801: CVGKESCSVQ VTPENFGGDP CRNVLKKLSV EAICS
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.