Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44153 | Soybean | nucleus | 97.63 | 97.86 |
| KRH10007 | Soybean | nucleus | 87.1 | 87.62 |
| KRH23324 | Soybean | vacuole | 86.63 | 87.04 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 81.89 | 82.28 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 79.17 | 78.98 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 78.34 | 78.9 |
| CDX97513 | Canola | golgi, vacuole | 78.22 | 78.69 |
| CDY23637 | Canola | golgi, vacuole | 77.99 | 78.55 |
| CDY51738 | Canola | golgi, vacuole | 77.75 | 78.31 |
| Solyc03g121540.2.1 | Tomato | nucleus | 77.51 | 78.16 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 77.28 | 77.92 |
| CDY37486 | Canola | golgi, vacuole | 76.92 | 77.47 |
| PGSC0003DMT400083896 | Potato | extracellular | 75.5 | 76.41 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 75.86 | 76.31 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 75.38 | 76.29 |
| Bra021506.1-P | Field mustard | vacuole | 77.63 | 76.19 |
| Solyc06g062580.2.1 | Tomato | nucleus | 75.62 | 75.98 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 63.91 | 73.57 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 63.55 | 73.56 |
| KRH12385 | Soybean | vacuole | 61.18 | 71.71 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 62.37 | 71.6 |
| KRH37385 | Soybean | nucleus | 61.07 | 71.57 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 62.13 | 71.33 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 70.77 | 71.28 |
| GSMUA_Achr6P35850_001 | Banana | golgi, vacuole | 69.11 | 70.87 |
| KRH02714 | Soybean | golgi, vacuole | 70.3 | 70.8 |
| Os01t0580200-01 | Rice | golgi, vacuole | 68.76 | 70.25 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 60.83 | 70.22 |
| OQU87043 | Sorghum | golgi, vacuole | 68.28 | 69.77 |
| Zm00001d044290_P005 | Maize | golgi, vacuole | 68.28 | 69.52 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 68.52 | 69.18 |
| TraesCS3A01G208600.1 | Wheat | plastid | 68.17 | 68.98 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 68.17 | 68.98 |
| HORVU3Hr1G050450.12 | Barley | golgi, vacuole | 67.69 | 68.83 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 57.63 | 67.83 |
| TraesCS7D01G359500.1 | Wheat | golgi | 57.51 | 67.78 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 57.16 | 67.55 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 57.4 | 67.55 |
| KRH15132 | Soybean | mitochondrion, nucleus | 58.34 | 67.35 |
| EER88554 | Sorghum | golgi, vacuole | 57.75 | 67.31 |
| Zm00001d046357_P001 | Maize | extracellular | 57.28 | 67.04 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 57.4 | 66.99 |
| KRH05876 | Soybean | nucleus | 57.99 | 66.94 |
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 57.4 | 66.9 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 39.05 | 66.0 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 56.57 | 65.93 |
| EES06516 | Sorghum | mitochondrion, plastid | 56.92 | 65.0 |
| KRH61101 | Soybean | nucleus | 56.57 | 64.95 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 57.16 | 64.66 |
| KRH76716 | Soybean | nucleus | 64.85 | 64.55 |
| KRH28740 | Soybean | nucleus | 64.5 | 63.89 |
| HORVU6Hr1G039490.6 | Barley | plastid | 57.75 | 63.87 |
| KRH08131 | Soybean | nucleus | 63.79 | 63.56 |
| KRH69834 | Soybean | extracellular, golgi | 63.43 | 63.21 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 62.72 | 63.02 |
| KRH51779 | Soybean | vacuole | 51.6 | 61.15 |
| Zm00001d053585_P002 | Maize | plastid | 56.33 | 57.42 |
| KRH22910 | Soybean | nucleus | 55.74 | 56.07 |
| KRH26431 | Soybean | golgi, vacuole | 54.79 | 55.12 |
| KRG89008 | Soybean | nucleus | 53.85 | 54.43 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 53.96 | 54.42 |
| KRH63980 | Soybean | vacuole | 51.95 | 52.08 |
| KRH53957 | Soybean | nucleus | 51.36 | 51.36 |
| KRH64633 | Soybean | vacuole | 42.13 | 51.15 |
| KRH53267 | Soybean | golgi, vacuole | 41.89 | 50.79 |
| KRH40964 | Soybean | golgi, vacuole | 41.66 | 50.0 |
| KRH53958 | Soybean | golgi, vacuole | 41.89 | 49.37 |
| KRH63978 | Soybean | golgi, vacuole | 41.89 | 49.37 |
| KRH19351 | Soybean | extracellular, golgi, vacuole | 47.57 | 48.61 |
| KRH38264 | Soybean | endoplasmic reticulum, golgi, vacuole | 47.57 | 48.32 |
| KRH70131 | Soybean | vacuole | 47.46 | 48.02 |
| KRH02579 | Soybean | extracellular, golgi, vacuole | 47.69 | 47.75 |
| KRH42784 | Soybean | nucleus | 50.89 | 47.3 |
| KRH07365 | Soybean | extracellular, golgi, vacuole | 45.44 | 46.49 |
| KRH48710 | Soybean | vacuole | 46.15 | 46.1 |
| KRH48708 | Soybean | vacuole | 46.15 | 46.1 |
| KRH60700 | Soybean | extracellular, golgi, vacuole | 44.14 | 44.19 |
| KRH06832 | Soybean | mitochondrion | 38.58 | 43.47 |
| KRH24309 | Soybean | golgi, vacuole | 43.2 | 43.3 |
| KRH38266 | Soybean | cytosol, peroxisome | 29.47 | 42.56 |
| KRH29286 | Soybean | extracellular, golgi, vacuole | 42.37 | 42.52 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | EntrezGene:100785688 |
| Gene3D:2.60.120.260 | Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EMBL:ACUP02004136 | EnsemblPlantsGene:GLYMA_07G010400 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | UniProt:I1KGC4 |
| InterPro:IPR000922 | InterPro:IPR008979 | EnsemblPlants:KRH47126 | ProteinID:KRH47126 | ProteinID:KRH47126.1 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PFscan:PS51257 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF74 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0002338688 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:783384..789811
Molecular Weight (calculated)
93583.5 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.228
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFHKLIMWN VPLLLVVVVF ACSLIGHASA SVSYDHKAIT INGQRRILLS GSIHYPRSTP EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYYFGGNY
101: DLVRFIKLVQ QAGLYVNLRI GPYVCAEWNF GGFPVWLKYI PGISFRTDNG PFKFQMEKFT KKIVDMMKAE RLFESQGGPI ILSQIENEYG PMEYEIGAPG
201: RAYTQWAAHM AVGLGTGVPW IMCKQEDAPD PIINTCNGFY CDYFSPNKAY KPKMWTEAWT GWFTEFGGAV PHRPAEDLAF SIARFIQKGG SFVNYYMYHG
301: GTNFGRTAGG PFIATSYDYD APLDEYGLPR QPKWGHLKDL HRAIKLCEPA LVSGDPTVQQ LGNYEEAHVF RSKSGACAAF LANYNPQSYA TVAFGNQRYN
401: LPPWSISILP NCKHTVYNTA RVGSQSTTMK MTRVPIHGGL SWKAFNEETT TTDDSSFTVT GLLEQINATR DLSDYLWYST DVVINSNEGF LRNGKNPVLT
501: VLSAGHALHV FINNQLSGTA YGSLEAPKLT FSESVRLRAG VNKISLLSVA VGLPNVGPHF ERWNAGVLGP ITLSGLNEGR RDLTWQKWSY KVGLKGEALN
601: LHSLSGSSSV EWLQGFLVSR RQPLTWYKTT FDAPAGVAPL ALDMGSMGKG QVWINGQSLG RYWPAYKASG SCGYCNYAGT YNEKKCGSNC GQASQRWYHV
701: PHSWLKPTGN LLVVFEELGG DPNGIFLVRR DIDSVCADIY EWQPNLVSYD MQASGKVRSP VRPKAHLSCG PGQKISSIKF ASFGTPVGSC GNYREGSCHA
801: HKSYDAFQKN CVGQSWCTVT VSPEIFGGDP CPSVMKKLSV EAICT
101: DLVRFIKLVQ QAGLYVNLRI GPYVCAEWNF GGFPVWLKYI PGISFRTDNG PFKFQMEKFT KKIVDMMKAE RLFESQGGPI ILSQIENEYG PMEYEIGAPG
201: RAYTQWAAHM AVGLGTGVPW IMCKQEDAPD PIINTCNGFY CDYFSPNKAY KPKMWTEAWT GWFTEFGGAV PHRPAEDLAF SIARFIQKGG SFVNYYMYHG
301: GTNFGRTAGG PFIATSYDYD APLDEYGLPR QPKWGHLKDL HRAIKLCEPA LVSGDPTVQQ LGNYEEAHVF RSKSGACAAF LANYNPQSYA TVAFGNQRYN
401: LPPWSISILP NCKHTVYNTA RVGSQSTTMK MTRVPIHGGL SWKAFNEETT TTDDSSFTVT GLLEQINATR DLSDYLWYST DVVINSNEGF LRNGKNPVLT
501: VLSAGHALHV FINNQLSGTA YGSLEAPKLT FSESVRLRAG VNKISLLSVA VGLPNVGPHF ERWNAGVLGP ITLSGLNEGR RDLTWQKWSY KVGLKGEALN
601: LHSLSGSSSV EWLQGFLVSR RQPLTWYKTT FDAPAGVAPL ALDMGSMGKG QVWINGQSLG RYWPAYKASG SCGYCNYAGT YNEKKCGSNC GQASQRWYHV
701: PHSWLKPTGN LLVVFEELGG DPNGIFLVRR DIDSVCADIY EWQPNLVSYD MQASGKVRSP VRPKAHLSCG PGQKISSIKF ASFGTPVGSC GNYREGSCHA
801: HKSYDAFQKN CVGQSWCTVT VSPEIFGGDP CPSVMKKLSV EAICT
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.