Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH26431 Soybean golgi, vacuole 95.36 95.36
KRH29942 Soybean extracellular, golgi, vacuole 84.64 84.84
KRG89008 Soybean nucleus 82.14 82.54
VIT_06s0004g03020.t01 Wine grape extracellular 79.52 78.96
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 74.76 73.71
CDY15749 Canola golgi, vacuole 74.05 73.7
Bra011946.1-P Field mustard golgi, vacuole 73.57 73.14
CDY04567 Canola golgi, vacuole 73.81 72.94
Bra000493.1-P Field mustard golgi, vacuole 73.1 72.75
CDY31204 Canola golgi, vacuole 72.98 72.63
Solyc11g069270.1.1 Tomato extracellular 73.33 72.3
PGSC0003DMT400020941 Potato extracellular 73.33 72.3
CDX83288 Canola golgi, vacuole 72.5 72.07
GSMUA_Achr4P20830_001 Banana golgi, vacuole 72.5 69.92
EER92534 Sorghum endoplasmic reticulum, golgi 70.83 69.19
GSMUA_Achr4P22060_001 Banana golgi, vacuole 68.57 68.57
TraesCS4A01G083700.3 Wheat extracellular 68.69 67.64
TraesCS4B01G220500.1 Wheat golgi 67.86 66.82
Zm00001d028474_P002 Maize vacuole 71.31 66.7
TraesCS4D01G220800.2 Wheat vacuole 68.57 66.44
HORVU0Hr1G008780.10 Barley plasma membrane, vacuole 68.33 66.05
Os03t0255100-01 Rice extracellular 69.17 60.77
KRH12385 Soybean vacuole 52.14 60.75
KRH37385 Soybean nucleus 52.14 60.75
KRH10007 Soybean nucleus 57.14 57.14
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 56.55 56.62
KRH23324 Soybean vacuole 56.55 56.48
KRH02714 Soybean golgi, vacuole 56.19 56.26
KRH44153 Soybean nucleus 55.95 55.75
KRH47126 Soybean nucleus 56.07 55.74
KRH76716 Soybean nucleus 56.19 55.59
KRH08131 Soybean nucleus 56.07 55.54
KRH15132 Soybean mitochondrion, nucleus 48.33 55.46
KRH05876 Soybean nucleus 48.1 55.19
KRH69834 Soybean extracellular, golgi 55.71 55.19
KRH61101 Soybean nucleus 48.33 55.16
KRH28740 Soybean nucleus 55.95 55.1
KRH63980 Soybean vacuole 53.69 53.5
KRH19351 Soybean extracellular, golgi, vacuole 52.02 52.84
KRH53957 Soybean nucleus 53.1 52.78
KRH02579 Soybean extracellular, golgi, vacuole 52.38 52.13
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 51.55 52.04
KRH51779 Soybean vacuole 43.45 51.19
KRH07365 Soybean extracellular, golgi, vacuole 49.88 50.73
KRH42784 Soybean nucleus 54.29 50.16
KRH64633 Soybean vacuole 41.43 50.0
KRH70131 Soybean vacuole 49.64 49.94
KRH63978 Soybean golgi, vacuole 42.62 49.93
KRH53958 Soybean golgi, vacuole 42.5 49.79
KRH40964 Soybean golgi, vacuole 41.67 49.72
KRH53267 Soybean golgi, vacuole 40.95 49.35
KRH48710 Soybean vacuole 49.4 49.05
KRH48708 Soybean vacuole 49.4 49.05
KRH38266 Soybean cytosol, peroxisome 32.38 46.5
KRH06832 Soybean mitochondrion 41.43 46.4
KRH60700 Soybean extracellular, golgi, vacuole 41.79 41.59
KRH29286 Soybean extracellular, golgi, vacuole 41.67 41.57
KRH24309 Soybean golgi, vacuole 41.67 41.52
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23EntrezGene:100804036
Gene3D:2.60.120.260Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80EMBL:ACUP02008441EnsemblPlantsGene:GLYMA_13G327000
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030312
InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFUniProt:I1M4L7
InterPro:IPR000922InterPro:IPR008979EnsemblPlants:KRH22910ProteinID:KRH22910ProteinID:KRH22910.1InterPro:Lectin_gal-bd_dom
PFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421
PANTHER:PTHR23421:SF72MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000233AB0C
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr13:-:42188111..42195363
Molecular Weight (calculated)
91660.1 Da
IEP (calculated)
6.736
GRAVY (calculated)
-0.192
Length
840 amino acids
Sequence
(BLAST)
001: MRATQIVLVL FWLLCIHSPT LFCANVEYDH RALVIDGKRR VLISGSIHYP RSTPEMWPDL IQKSKDGGLD VIETYVFWNL NEPVRGQYDF DGRKDLVKFV
101: KTVAAAGLYV HLRIGPYVCA EWNYGGFPLW LHFIPGIKFR TDNEPFKAEM KRFTAKIVDM IKEENLYASQ GGPVILSQIE NEYGNIDSAY GAAGKSYIKW
201: AATMATSLDT GVPWVMCQQA DAPDPIINTC NGFYCDQFTP NSNTKPKMWT ENWSGWFLPF GGAVPYRPVE DLAFAVARFF QRGGTFQNYY MYHGGTNFDR
301: TSGGPFIATS YDYDAPIDEY GIIRQPKWGH LKEVHKAIKL CEEALIATDP TITSLGPNLE AAVYKTGSVC AAFLANVDTK SDVTVNFSGN SYHLPAWSVS
401: ILPDCKNVVL NTAKINSASA ISSFTTESLK EDIGSSEASS TGWSWISEPV GISKADSFPQ TGLLEQINTT ADKSDYLWYS LSIDYKGDAG SQTVLHIESL
501: GHALHAFING KLAGSQTGNS GKYKFTVDIP VTLVAGKNTI DLLSLTVGLQ NYGAFFDTWG AGITGPVILK GLANGNTLDL SYQKWTYQVG LKGEDLGLSS
601: GSSGQWNSQS TFPKNQPLIW YKTTFAAPSG SDPVAIDFTG MGKGEAWVNG QSIGRYWPTY VASDAGCTDS CNYRGPYSAS KCRRNCGKPS QTLYHVPRSW
701: LKPSGNILVL FEEKGGDPTQ ISFVTKQTES LCAHVSDSHP PPVDLWNSDT ESGRKVGPVL SLTCPHDNQV ISSIKFASYG TPLGTCGNFY HGRCSSNKAL
801: SIVQKACIGS SSCSVGVSSE TFGNPCRGVA KSLAVEATCA
Best Arabidopsis Sequence Match ( AT2G28470.4 )
(BLAST)
001: MVKVRKMEMI LLLILVIVVA ATAANVTYDH RALVIDGKRK VLISGSIHYP RSTPEMWPEL IQKSKDGGLD VIETYVFWSG HEPEKNKYNF EGRYDLVKFV
101: KLAAKAGLYV HLRIGPYVCA EWNYGGFPVW LHFVPGIKFR TDNEPFKEEM QRFTTKIVDL MKQEKLYASQ GGPIILSQIE NEYGNIDSAY GAAAKSYIKW
201: SASMALSLDT GVPWNMCQQT DAPDPMINTC NGFYCDQFTP NSNNKPKMWT ENWSGWFLGF GDPSPYRPVE DLAFAVARFY QRGGTFQNYY MYHGGTNFDR
301: TSGGPLISTS YDYDAPIDEY GLLRQPKWGH LRDLHKAIKL CEDALIATDP TITSLGSNLE AAVYKTESGS CAAFLANVDT KSDATVTFNG KSYNLPAWSV
401: SILPDCKNVA FNTAKINSAT ESTAFARQSL KPDGGSSAEL GSQWSYIKEP IGISKADAFL KPGLLEQINT TADKSDYLWY SLRTDIKGDE TFLDEGSKAV
501: LHIESLGQVV YAFINGKLAG SGHGKQKISL DIPINLVTGT NTIDLLSVTV GLANYGAFFD LVGAGITGPV TLKSAKGGSS IDLASQQWTY QVGLKGEDTG
601: LATVDSSEWV SKSPLPTKQP LIWYKTTFDA PSGSEPVAID FTGTGKGIAW VNGQSIGRYW PTSIAGNGGC TESCDYRGSY RANKCLKNCG KPSQTLYHVP
701: RSWLKPSGNI LVLFEEMGGD PTQISFATKQ TGSNLCLTVS QSHPPPVDTW TSDSKISNRN RTRPVLSLKC PISTQVIFSI KFASFGTPKG TCGSFTQGHC
801: NSSRSLSLVQ KACIGLRSCN VEVSTRVFGE PCRGVVKSLA VEASCS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.