Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 6
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15749 | Canola | golgi, vacuole | 88.5 | 89.34 |
| Bra011946.1-P | Field mustard | golgi, vacuole | 88.38 | 89.11 |
| CDY04567 | Canola | golgi, vacuole | 88.73 | 88.94 |
| Bra000493.1-P | Field mustard | golgi, vacuole | 87.21 | 88.03 |
| CDY31204 | Canola | golgi, vacuole | 86.97 | 87.8 |
| CDX83288 | Canola | golgi, vacuole | 86.5 | 87.22 |
| KRH22910 | Soybean | nucleus | 73.71 | 74.76 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 72.65 | 73.87 |
| VIT_06s0004g03020.t01 | Wine grape | extracellular | 72.77 | 73.29 |
| KRH26431 | Soybean | golgi, vacuole | 71.95 | 72.98 |
| KRG89008 | Soybean | nucleus | 71.01 | 72.37 |
| PGSC0003DMT400020941 | Potato | extracellular | 69.13 | 69.13 |
| GSMUA_Achr4P20830_001 | Banana | golgi, vacuole | 70.07 | 68.54 |
| Solyc11g069270.1.1 | Tomato | extracellular | 68.43 | 68.43 |
| GSMUA_Achr4P22060_001 | Banana | golgi, vacuole | 66.2 | 67.14 |
| EER92534 | Sorghum | endoplasmic reticulum, golgi | 67.37 | 66.74 |
| TraesCS4A01G083700.3 | Wheat | extracellular | 66.2 | 66.12 |
| TraesCS4B01G220500.1 | Wheat | golgi | 65.49 | 65.42 |
| HORVU0Hr1G008780.10 | Barley | plasma membrane, vacuole | 66.43 | 65.13 |
| TraesCS4D01G220800.2 | Wheat | vacuole | 65.73 | 64.59 |
| Zm00001d028474_P002 | Maize | vacuole | 67.61 | 64.14 |
| Os03t0255100-01 | Rice | extracellular | 66.9 | 59.62 |
| AT5G56870.1 | Thale cress | vacuole | 46.48 | 54.7 |
| AT1G45130.1 | Thale cress | golgi, vacuole | 46.95 | 54.64 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 53.87 | 54.19 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 54.34 | 54.09 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 48.47 | 52.88 |
| AT4G26140.7 | Thale cress | vacuole | 46.71 | 52.86 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 45.77 | 52.63 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 54.23 | 52.09 |
| AT5G20710.1 | Thale cress | vacuole | 48.94 | 50.48 |
| AT1G31740.1 | Thale cress | vacuole | 45.89 | 50.19 |
| AT5G63800.1 | Thale cress | vacuole | 40.02 | 47.49 |
| AT1G77410.3 | Thale cress | golgi, vacuole | 44.72 | 46.46 |
| AT2G16730.1 | Thale cress | extracellular, golgi, vacuole | 40.61 | 40.8 |
| AT4G35010.1 | Thale cress | vacuole | 39.79 | 40.12 |
| AT4G38590.2 | Thale cress | golgi, vacuole | 39.2 | 31.75 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:817395 | ProteinID:AAD21482.1 | ProteinID:AEC08127.1 |
| ProteinID:AEC08128.1 | EMBL:AJ270304 | ProteinID:ANM62009.1 | ProteinID:ANM62010.1 | ProteinID:ANM62011.1 | ArrayExpress:AT2G28470 |
| EnsemblPlantsGene:AT2G28470 | RefSeq:AT2G28470 | TAIR:AT2G28470 | RefSeq:AT2G28470-TAIR-G | EnsemblPlants:AT2G28470.1 | TAIR:AT2G28470.1 |
| Symbol:BGAL8 | EMBL:D88744 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 | GO:GO:0048046 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat |
| InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom |
| RefSeq:NP_001189624.1 | RefSeq:NP_001324192.1 | RefSeq:NP_001324193.1 | RefSeq:NP_001324194.1 | RefSeq:NP_850121.1 | PFAM:PF01301 |
| PFAM:PF02140 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 |
| PO:PO:0006340 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00742 |
| ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF74 | UniProt:Q9SCV4 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0000196CDD | SEG:seg | : |
Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
Coordinates
chr2:-:12168840..12173991
Molecular Weight (calculated)
93214.7 Da
IEP (calculated)
7.926
GRAVY (calculated)
-0.224
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.