Factsheet for GSMUA_Achr4P20830_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	72.56	75.24
VIT_06s0004g03020.t01	Wine grape	extracellular	72.33	74.47
KRH29942	Soybean	extracellular, golgi, vacuole	70.61	73.39
KRH22910	Soybean	nucleus	69.92	72.5
KRH26431	Soybean	golgi, vacuole	68.89	71.43
CDY15749	Canola	golgi, vacuole	68.66	70.85
KRG89008	Soybean	nucleus	67.62	70.45
Bra000493.1-P	Field mustard	golgi, vacuole	68.08	70.26
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	68.54	70.07
Bra011946.1-P	Field mustard	golgi, vacuole	67.97	70.06
CDY31204	Canola	golgi, vacuole	67.85	70.02
CDY04567	Canola	golgi, vacuole	68.31	70.0
CDX83288	Canola	golgi, vacuole	67.74	69.82
TraesCS4A01G083700.3	Wheat	extracellular	68.31	69.75
EER92534	Sorghum	endoplasmic reticulum, golgi	68.77	69.65
PGSC0003DMT400020941	Potato	extracellular	68.08	69.6
Solyc11g069270.1.1	Tomato	extracellular	67.74	69.25
TraesCS4B01G220500.1	Wheat	golgi	67.51	68.93
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	68.66	68.81
TraesCS4D01G220800.2	Wheat	vacuole	67.97	68.28
Zm00001d028474_P002	Maize	vacuole	68.89	66.82
Os03t0255100-01	Rice	extracellular	68.66	62.55
GSMUA_Achr7P08970_001	Banana	vacuole	49.48	59.04
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	49.37	58.42
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	49.02	58.17
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	49.02	58.02
GSMUA_Achr7P08940_001	Banana	vacuole	48.56	57.79
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	52.93	55.95
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	47.53	54.47
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	53.16	54.28
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	53.85	54.03
GSMUA_Achr4P06620_001	Banana	cytosol	39.04	52.8
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	37.08	52.18
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	46.84	51.97
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	31.46	51.7
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	49.25	51.01
GSMUA_Achr2P16780_001	Banana	plastid	49.25	51.01
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	50.29	49.89
GSMUA_Achr11P...	Banana	golgi, vacuole	44.66	47.61
GSMUA_AchrUn_...	Banana	extracellular, vacuole	42.71	45.59
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	46.27	44.88
GSMUA_Achr1P26480_001	Banana	vacuole	41.79	44.77
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	42.37	43.98
GSMUA_Achr1P14790_001	Banana	vacuole	41.56	43.88

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr4G20830_001	EnsemblPlants:GSMUA_Achr4P20830_001	EnsemblPlants:GSMUA_Achr4T20830_001	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M0SQP6	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296B138	SEG:seg	:	:	:

Description

Beta-galactosidase 6 [Source:GMGC_GENE;Acc:GSMUA_Achr4G20830_001]

Coordinates

chr4:-:21371757..21384912

Molecular Weight (calculated)

95447.8 Da

IEP (calculated)

6.325

GRAVY (calculated)

-0.201

Length

871 amino acids

Sequence
(BLAST)

001: MVAGTAAAAT DAAYPKLSPF LVIFLCFLCG CSHLCAAATV TYDHRALVID GTRRVLISGS IHYPRSTPEN LQPSVAVLQM WPDLIEKSKN GGLDVVETYV
101: FWNLHEPVQG QYDFEGRKDL VRFVKTVAEA GLYVHLRIGP YVCAEWNYGG FPLWLHFIPG IKFRTDNEPF KREMQRFTTK IVEMMKQEKL YASQGGPIIL
201: SQIENEYGNI DSSYGAAAKT YINWSASMAT SLDTGVPWVM CQQADAPDPI INTCNGFYCD QFTPNSNKKP KMWTENWTGW FLSFGGGVPY RPVEDLAFAV
301: ARFFQRGGTF QNYYMYHGGT NFGRTTGGPF IATSYDYDAP IDEYGILRQP KWGHLRDLHK VIKLCEGALV ATDPTYTSLG QNLEAHVYKT ASGSCAAFLA
401: NVGTQSDATV TFNGKTYNLP AWSVSILPDC QNVVFNTAQI NSQSTLLETK YVKTYSQASD QPINSSEISE SSWTFIKEPV GITKSSAFTK VGLLEQINTT
501: ADASDYLWYS TSIDINGNEP FLFNGTQTTL HVESLGHVLH AFVNGQLSGS GMGNSDNAKV TLDKSIMLAP GKNKIDLLSA TVGLQNYGAF FDLWGAGITG
601: PVMLKGQKST TDLSSNDWTY QIGLKGEELG IYEESGDSSI WISQSALPKN QPLVWYKGYF DAPEGNDPVA IDFTGMGKGE AWVNGQSIGR YWPAYVSPQT
701: GCTTSCNYRG AFSSNKCLKN CGKPSQRLYH VPRSLIQSGK NRLVLFEEMS GDPTQISFAT RQTVSLCGHV SESHPALLDA QGTAPSNVPM LRLECPYPNQ
801: KISSIKFASF GTPHGTCGSY NHGKCSSDDA LAVMQQACIG VQSCDVEVSI KLFGDPCRNV IKSLAVEAAC S

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.