CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04567	Canola	golgi, vacuole	96.45	95.76
CDY31204	Canola	golgi, vacuole	90.64	90.64
CDX83288	Canola	golgi, vacuole	89.69	89.59
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	89.34	88.5
KRH22910	Soybean	nucleus	73.7	74.05
KRH29942	Soybean	extracellular, golgi, vacuole	72.87	73.39
KRH26431	Soybean	golgi, vacuole	72.27	72.62
VIT_06s0004g03020.t01	Wine grape	extracellular	72.75	72.58
KRG89008	Soybean	nucleus	71.21	71.89
PGSC0003DMT400020941	Potato	extracellular	69.79	69.13
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	70.85	68.66
Solyc11g069270.1.1	Tomato	extracellular	68.96	68.31
CDX88594	Canola	golgi, vacuole	25.71	66.77
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	66.23	66.55
EER92534	Sorghum	endoplasmic reticulum, golgi	67.65	66.4
TraesCS4A01G083700.3	Wheat	extracellular	66.23	65.53
TraesCS4B01G220500.1	Wheat	golgi	65.76	65.06
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	66.23	64.33
CDX98327	Canola	golgi, vacuole	19.08	64.14
Zm00001d028474_P002	Maize	vacuole	68.25	64.14
TraesCS4D01G220800.2	Wheat	vacuole	65.76	64.01
Os03t0255100-01	Rice	extracellular	67.06	59.2
CDX76255	Canola	extracellular	8.89	58.59
CDX94367	Canola	mitochondrion	47.99	56.88
CDY36028	Canola	plastid	47.04	55.76
CDY53959	Canola	golgi, vacuole	48.1	55.62
CDX95380	Canola	vacuole	47.87	55.57
CDY47949	Canola	golgi, vacuole	47.99	55.48
CDX92753	Canola	golgi, vacuole	46.8	55.48
CDY51738	Canola	golgi, vacuole	54.86	55.18
CDY11899	Canola	golgi, vacuole	47.04	54.99
CDX76254	Canola	golgi, nucleus, vacuole	38.27	54.93
CDX75569	Canola	golgi, vacuole	53.79	54.9
CDX97513	Canola	golgi, vacuole	54.62	54.88
CDY42755	Canola	vacuole	46.21	54.78
CDX69219	Canola	vacuole	53.32	54.61
CDY23637	Canola	golgi, vacuole	54.27	54.59
CDY37486	Canola	golgi, vacuole	54.15	54.47
CDY59693	Canola	vacuole	54.38	53.62
CDX89360	Canola	mitochondrion	44.31	53.51
CDY32919	Canola	golgi, vacuole	45.73	53.46
CDY20708	Canola	golgi, vacuole	45.5	53.19
CDY70160	Canola	vacuole	34.12	52.84
CDY43757	Canola	golgi, vacuole	45.26	51.55
CDY23785	Canola	vacuole	54.27	51.29
CDX67790	Canola	vacuole	49.41	51.17
CDX84446	Canola	golgi, vacuole	44.79	51.01
CDY34975	Canola	golgi, plasma membrane, vacuole	47.51	50.89
CDY19166	Canola	golgi, vacuole	53.44	50.79
CDY28339	Canola	vacuole	47.39	50.76
CDX93659	Canola	vacuole	48.93	50.49
CDY65885	Canola	vacuole	49.05	50.43
CDY69031	Canola	cytosol, plastid, vacuole	35.07	47.67
CDY39845	Canola	vacuole	40.52	47.5
CDX84445	Canola	vacuole	40.28	47.22
CDY69471	Canola	cytosol	22.87	46.39
CDY70594	Canola	cytosol	22.87	46.39
CDY31349	Canola	vacuole	40.28	45.88
CDY32304	Canola	cytosol	46.8	44.78
CDY59691	Canola	cytosol, nucleus, vacuole	18.25	43.75
CDY43756	Canola	cytosol, nucleus, peroxisome	26.07	43.14
CDY59725	Canola	cytosol	15.88	42.95
CDX69103	Canola	vacuole	40.76	40.76
CDX75479	Canola	vacuole	40.76	40.71
CDY40650	Canola	vacuole	40.64	40.64
CDX72512	Canola	vacuole	40.52	40.52
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	37.2	40.26
CDY53917	Canola	plastid	47.39	38.87
CDX72747	Canola	vacuole	40.4	38.49
CDX67763	Canola	golgi, plasma membrane, vacuole	33.41	36.58
CDY22419	Canola	cytosol	40.52	35.77
CDY70118	Canola	cytosol	24.76	35.19
CDY02241	Canola	golgi, vacuole	39.93	34.07
CDX89744	Canola	vacuole	39.45	30.66

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078FS66	UniProt:A0A078FS66	EnsemblPlants:CDY15749
ProteinID:CDY15749	ProteinID:CDY15749.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00089988001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	MetaCyc:PWY-6807
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EC5082	SEG:seg

Description

BnaC04g15750DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078FS66]

Coordinates

chrLK032057:-:174238..178635

Molecular Weight (calculated)

92057.3 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.226

Length

844 amino acids

Sequence
(BLAST)

001: MVRGKKVEIV SLLVLVIVMA ATAATVTYDH RALVIDGKRK ILISGSIHYP RSTPEMWPDL IQKSKDGGLD VIETYVFWNG HEPEKNKYNF EGRYDLVKFV
101: KLAAKAGLYV HLRIGPYACA EWNYGGFPVW LHFVPGIKFR TDNEPFKAEM QRFTAKIVDL MKQEKLFASQ GGPIILSQIE NEYGNIDSEY GAAGKSYMKW
201: SASMALSLDT GVPWNMCQQG DAPDPIINTC NGFYCDQFTP NSNNKPKMWT ENWSGWFLGF GEPTPYRPVE DLAFAVARFF QRGGTFQNYY MYHGGTNFER
301: TSGGPLISTS YDYDAPIDEY GLLRQPKWGH LRDLHKAIKL CEDALIATDP KITSLGSNLE AAVYKTSTGS CAAFLANIGT QSDATVTFNG KSYRLPAWSV
401: SILPDCKNVA FNTAKINSAT ESTTFARQSL KPDGGSSAEL GSQWSYIKET IGISKDDAFV KPGLLEQINT TADKSDYLWY SLRMDIKGDE TFLDEGSKAV
501: LHIQSIGQVV YAFINGKLAG SGNGRTKISL DIPINLVTGK NTIDLLSVTV GLANYGAFFD IIGAGITGPV SLKSAKTGSS MDLSSQQWTY QVGLKGEDTG
601: LGSGDSSEWI SKSPLPTSQP LIWYKTTFDA PSGSDPVAID FTGTGKGIAW VNGQSIGRYW PTSIARADGC VGSCNYRGTY RNNKCLKNCG KPSQTLYHVP
701: RSWIKPSGNT LVLLEEMGGD PTKISFATKH TGSNLCLKVS QSHPAPVDTW TSDFKFSNRT SPVLSLKCPV STQMISSINF ASFGTPTGTC GSFSHGRCSS
801: ARSLSVVQKA CVGSRSCKVE VSTRVFGEPC RGVVKSLAVE AACA

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.