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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018721.1-P Field mustard extracellular, golgi, vacuole 86.19 96.31
CDX98327 Canola golgi, vacuole 28.97 94.42
CDX67790 Canola vacuole 90.95 91.29
CDY34975 Canola golgi, plasma membrane, vacuole 87.9 91.24
CDY70160 Canola vacuole 60.76 91.19
CDY28339 Canola vacuole 87.78 91.12
CDY69031 Canola cytosol, plastid, vacuole 68.58 90.34
AT1G31740.1 Thale cress vacuole 79.1 83.06
CDY32304 Canola cytosol 88.88 82.43
CDY65885 Canola vacuole 82.15 81.85
CDY53917 Canola plastid 86.43 68.71
PGSC0003DMT400059880 Potato cytosol 62.35 66.23
VIT_11s0016g00680.t01 Wine grape vacuole 66.99 65.63
Solyc07g042220.1.1 Tomato unclear 65.53 65.53
KRH19351 Soybean extracellular, golgi, vacuole 65.04 64.33
CDX88594 Canola golgi, vacuole 24.94 62.77
KRH02579 Soybean extracellular, golgi, vacuole 64.43 62.44
CDX67763 Canola golgi, plasma membrane, vacuole 57.34 60.83
CDX76255 Canola extracellular 9.29 59.38
GSMUA_Achr5P11870_001 Banana extracellular, golgi 54.4 56.69
Os06t0628500-00 Rice extracellular, golgi, vacuole 20.17 56.12
HORVU2Hr1G057440.2 Barley vacuole 35.82 55.92
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 42.05 55.57
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 35.82 55.28
GSMUA_Achr2P21790_001 Banana golgi, vacuole 55.87 54.34
HORVU1Hr1G003210.2 Barley golgi, vacuole 53.42 52.84
TraesCS1A01G024100.1 Wheat vacuole 53.3 52.66
Os10t0330600-01 Rice extracellular 53.3 52.66
HORVU1Hr1G003200.1 Barley golgi, vacuole 53.18 52.41
Zm00001d043393_P001 Maize extracellular 52.45 52.19
TraesCS1D01G024200.1 Wheat vacuole 52.81 52.11
TraesCS1B01G030400.1 Wheat vacuole 52.93 52.11
Os10t0340600-01 Rice extracellular, golgi, vacuole 52.45 51.81
EES03081 Sorghum extracellular 52.32 51.57
GSMUA_Achr5P11850_001 Banana extracellular, golgi 54.28 49.44
CDY11899 Canola golgi, vacuole 43.52 49.31
CDX95380 Canola vacuole 43.77 49.24
CDY15749 Canola golgi, vacuole 50.49 48.93
CDX94367 Canola mitochondrion 42.3 48.6
CDY36028 Canola plastid 42.18 48.46
CDY53959 Canola golgi, vacuole 43.15 48.36
CDY04567 Canola golgi, vacuole 50.12 48.24
CDY31204 Canola golgi, vacuole 49.76 48.22
CDY47949 Canola golgi, vacuole 42.91 48.08
CDX83288 Canola golgi, vacuole 49.63 48.05
CDX92753 Canola golgi, vacuole 41.81 48.03
CDY20708 Canola golgi, vacuole 42.3 47.92
CDY32919 Canola golgi, vacuole 42.18 47.78
CDY42755 Canola vacuole 41.56 47.75
CDX76254 Canola golgi, nucleus, vacuole 33.86 47.11
CDX97513 Canola golgi, vacuole 47.92 46.67
CDY23637 Canola golgi, vacuole 47.8 46.6
CDY51738 Canola golgi, vacuole 47.68 46.48
CDY37486 Canola golgi, vacuole 47.55 46.36
CDY43757 Canola golgi, vacuole 41.81 46.15
CDX84446 Canola golgi, vacuole 41.69 46.02
CDX89360 Canola mitochondrion 39.0 45.64
CDX75569 Canola golgi, vacuole 45.72 45.22
CDX69219 Canola vacuole 45.23 44.9
CDY59693 Canola vacuole 46.82 44.74
CDY39845 Canola vacuole 37.78 42.92
CDX84445 Canola vacuole 37.65 42.78
CDY31349 Canola vacuole 37.65 41.57
CDY19166 Canola golgi, vacuole 44.99 41.44
CDY23785 Canola vacuole 45.11 41.32
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 37.9 39.74
CDX69103 Canola vacuole 40.83 39.57
CDX75479 Canola vacuole 40.83 39.53
CDY70594 Canola cytosol 20.05 39.42
CDY69471 Canola cytosol 20.05 39.42
CDX72512 Canola vacuole 39.85 38.63
CDY40650 Canola vacuole 39.85 38.63
CDY43756 Canola cytosol, nucleus, peroxisome 23.96 38.43
CDY59725 Canola cytosol 14.55 38.14
CDY59691 Canola cytosol, nucleus, vacuole 15.89 36.93
CDY70118 Canola cytosol 25.92 35.69
CDX72747 Canola vacuole 38.39 35.44
CDY02241 Canola golgi, vacuole 40.22 33.27
CDY22419 Canola cytosol 38.26 32.74
CDX89744 Canola vacuole 39.98 30.11
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078DZ01EnsemblPlants:CDX93659ProteinID:CDX93659
ProteinID:CDX93659.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00156346001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979
InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228
PANTHER:PTHR23421PANTHER:PTHR23421:SF88MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTM
UniParc:UPI0004EDE76ESEG:seg::::
Description
BnaA06g03890D
Coordinates
chrLK031876:+:1193708..1197597
Molecular Weight (calculated)
91393.3 Da
IEP (calculated)
7.902
GRAVY (calculated)
-0.400
Length
818 amino acids
Sequence
(BLAST)
001: MVSLRFILCC LLVGSSYATI VSHDGRAITI DGHRRVLLSG SIHYPRSTPE MWPDLIKKSK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIKD
101: EGLYGVLRIG PYACAEWNYG GFPVWLHNIP GMVFRTTNKA FMDEMQNFTT MIVDMVKKEK LFASQGGPII LAQIENEYGN VMGPYGEAGK TYIKWCANMA
201: QTLDVGVPWI MCQQNDAPQP MLNTCNGFYC DNFKPNNPNT PKMWTENWTG WFKQWGGKNP HRTTEDVAYS VAKFFQRGGT FNNYYMYHGG TNFDRTAGGP
301: YITTSYDYDA PLDEYGNLNQ PKYGHLKKLH DVLHSMEKTL TYGNISTIDF GKSASATIYT TGEGSSCFFG NGNENSDAKI SFQGKSYVVP AWSVTILPDC
401: KTEAYNTAKI TTQISMMVKK PNEAEDDPST LKWSWRPENM DDFLLKGKGE STKTQLVDQK VVSNDQSDYL WYMTTVKFRK RDLVLGKNMT LRINSTAHVL
501: HAFVNGKHIG NQHAENGKFH YVFEKDAKFK SGRNVISLLS ITVGLQNYGS FFESVPTGIT GPISIIGRNS DETIVKDLSA HKWSYKTGLN GFENQLFRTE
601: SPSKWSAESV PLNRSMTWYK ATFKAPFGND PVVVDLLGLG KGTAWVNGNN IGRYWPAFIS SGDGCSVKCN YRGAYHAEKC LTGCGEPTQR WYHVPRSFLN
701: AGDNTLVLFE EMGGNPSLVN FQTTRVGSVC ANVYEKNVIE LSCDRKPISA IKFASFGNPN GNCGSFEKGT CEEINNAVDI LTQECVGKEK CSIDVSTEKF
801: GAPDCGGAAR RLAIEAIC
Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)
001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC
Arabidopsis Description
BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.