Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36360.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G36360.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59691 | Canola | cytosol, nucleus, vacuole | 81.41 | 72.16 |
| Bra017756.1-P | Field mustard | cytosol, nucleus, vacuole | 57.05 | 58.55 |
| CDY59693 | Canola | vacuole | 91.67 | 33.41 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 86.54 | 31.54 |
| CDX69219 | Canola | vacuole | 82.05 | 31.07 |
| CDY69471 | Canola | cytosol | 41.03 | 30.77 |
| CDY70594 | Canola | cytosol | 41.03 | 30.77 |
| CDX75569 | Canola | golgi, vacuole | 81.09 | 30.59 |
| GSMUA_Achr4P06620_001 | Banana | cytosol | 57.05 | 27.64 |
| KRH69834 | Soybean | extracellular, golgi | 71.15 | 26.18 |
| KRH76716 | Soybean | nucleus | 70.83 | 26.03 |
| KRH08131 | Soybean | nucleus | 70.51 | 25.94 |
| KRH28740 | Soybean | nucleus | 70.83 | 25.91 |
| VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 68.91 | 25.44 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 65.38 | 24.14 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 64.74 | 23.91 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 60.58 | 22.37 |
| CDY53959 | Canola | golgi, vacuole | 52.24 | 22.33 |
| EER92805 | Sorghum | vacuole | 59.94 | 22.21 |
| CDY36028 | Canola | plastid | 50.64 | 22.19 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 60.26 | 22.17 |
| GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 60.58 | 22.16 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 59.94 | 22.16 |
| HORVU4Hr1G074280.4 | Barley | vacuole | 59.94 | 22.08 |
| CDY47949 | Canola | golgi, vacuole | 51.6 | 22.05 |
| GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 60.58 | 21.77 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 41.03 | 21.77 |
| Zm00001d048440_P003 | Maize | vacuole | 59.94 | 21.52 |
| Os03t0165400-01 | Rice | vacuole | 57.05 | 21.17 |
| Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 60.26 | 20.48 |
| CDY51738 | Canola | golgi, vacuole | 53.21 | 19.79 |
| CDX97513 | Canola | golgi, vacuole | 53.21 | 19.76 |
| CDY23637 | Canola | golgi, vacuole | 52.88 | 19.67 |
| CDY37486 | Canola | golgi, vacuole | 51.92 | 19.31 |
| CDY43756 | Canola | cytosol, nucleus, peroxisome | 31.09 | 19.02 |
| CDX89360 | Canola | mitochondrion | 41.67 | 18.6 |
| CDY11899 | Canola | golgi, vacuole | 42.31 | 18.28 |
| CDY69031 | Canola | cytosol, plastid, vacuole | 36.22 | 18.2 |
| CDX92753 | Canola | golgi, vacuole | 41.35 | 18.12 |
| CDY42755 | Canola | vacuole | 41.35 | 18.12 |
| CDX94367 | Canola | mitochondrion | 41.03 | 17.98 |
| CDX95380 | Canola | vacuole | 41.67 | 17.88 |
| CDY32919 | Canola | golgi, vacuole | 41.35 | 17.87 |
| CDY20708 | Canola | golgi, vacuole | 40.71 | 17.59 |
| CDY70118 | Canola | cytosol | 32.37 | 17.0 |
| CDY15749 | Canola | golgi, vacuole | 42.95 | 15.88 |
| CDX83288 | Canola | golgi, vacuole | 42.63 | 15.74 |
| CDY31204 | Canola | golgi, vacuole | 42.31 | 15.64 |
| CDY04567 | Canola | golgi, vacuole | 42.31 | 15.53 |
| CDY43757 | Canola | golgi, vacuole | 36.22 | 15.25 |
| CDX84446 | Canola | golgi, vacuole | 36.22 | 15.25 |
| CDY65885 | Canola | vacuole | 39.1 | 14.86 |
| CDX93659 | Canola | vacuole | 38.14 | 14.55 |
| CDX67790 | Canola | vacuole | 36.86 | 14.11 |
| CDX84445 | Canola | vacuole | 31.09 | 13.47 |
| CDY39845 | Canola | vacuole | 30.13 | 13.06 |
| CDY23785 | Canola | vacuole | 37.18 | 12.99 |
| CDY19166 | Canola | golgi, vacuole | 36.86 | 12.95 |
| CDY31414 | Canola | cytosol, golgi, mitochondrion, peroxisome | 32.05 | 12.82 |
| CDY34975 | Canola | golgi, plasma membrane, vacuole | 32.05 | 12.69 |
| CDY28339 | Canola | vacuole | 31.73 | 12.56 |
| CDY31349 | Canola | vacuole | 29.49 | 12.42 |
| CDY32304 | Canola | cytosol | 34.62 | 12.24 |
| CDX72512 | Canola | vacuole | 32.05 | 11.85 |
| CDX69103 | Canola | vacuole | 32.05 | 11.85 |
| CDY40650 | Canola | vacuole | 32.05 | 11.85 |
| CDX75479 | Canola | vacuole | 32.05 | 11.83 |
| CDX72747 | Canola | vacuole | 31.41 | 11.06 |
| CDY02241 | Canola | golgi, vacuole | 33.97 | 10.72 |
| CDY22419 | Canola | cytosol | 31.41 | 10.25 |
| CDY53917 | Canola | plastid | 32.69 | 9.91 |
| CDX89744 | Canola | vacuole | 33.65 | 9.67 |
| CDY70160 | Canola | vacuole | 7.69 | 4.4 |
| CDX67763 | Canola | golgi, plasma membrane, vacuole | 4.17 | 1.69 |
| CDX76255 | Canola | extracellular | 0.64 | 1.56 |
| CDX88594 | Canola | golgi, vacuole | 0.96 | 0.92 |
| CDX98327 | Canola | golgi, vacuole | 0.32 | 0.4 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:35.1 | GO:A0A078J5W7 | UniProt:A0A078J5W7 | EnsemblPlants:CDY59725 | ProteinID:CDY59725 |
| ProteinID:CDY59725.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00027631001 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_Hdrlase_35 | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | PFAM:PF02140 | PRINTS:PR00742 |
| PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF79 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | UniParc:UPI0004EDFF36 |
Description
BnaA03g59230DBnaA03g59230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5W7]
Coordinates
chrLK033799:-:29044..36716
Molecular Weight (calculated)
34337.1 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.208
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLINVFVDI GETESFLHGG ELPTLIIQST CHTVHIFVNG QLSGYAFGTR ENRRFTYRGN INLHSGTNRI TLLSVAVGLP NVGGHFESWN TGILVPVALH
101: GLSQGKRDLS WQKWTYQVGL RGEAMNLAYP TNTPSVEWMD ASLTVQKPQP LTWHKTYFDA PEGDEPLALD MEGMGKGQIL VNGESIGRYW TTFATGDCGN
201: CSYTGTYKPN KCLSGCGQPT QRYYYRDMKL SWLKPSQNLL VIFEEIGGNP SAVSLVKRSV SGVCAEKCVG KARCAVMISN TNFGKNPCPN VLKRLTVEAV
301: CSPETSLTSW KP
101: GLSQGKRDLS WQKWTYQVGL RGEAMNLAYP TNTPSVEWMD ASLTVQKPQP LTWHKTYFDA PEGDEPLALD MEGMGKGQIL VNGESIGRYW TTFATGDCGN
201: CSYTGTYKPN KCLSGCGQPT QRYYYRDMKL SWLKPSQNLL VIFEEIGGNP SAVSLVKRSV SGVCAEKCVG KARCAVMISN TNFGKNPCPN VLKRLTVEAV
301: CSPETSLTSW KP
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.