Factsheet for HORVU4Hr1G074280.4

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36360.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G280900.1	Wheat	golgi, vacuole	96.93	97.16
TraesCS4A01G022500.2	Wheat	golgi, vacuole	96.46	96.8
TraesCS4D01G279400.4	Wheat	vacuole	96.69	96.58
EER92805	Sorghum	vacuole	85.24	85.75
Os03t0165400-01	Rice	vacuole	84.53	85.14
Zm00001d048440_P003	Maize	vacuole	85.24	83.08
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	85.12	78.54
GSMUA_Achr4P06620_001	Banana	cytosol	57.97	76.24
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	76.03	75.5
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	77.33	75.46
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	69.66	69.82
KRH76716	Soybean	nucleus	69.89	69.73
KRH15132	Soybean	mitochondrion, nucleus	59.98	69.4
KRH69834	Soybean	extracellular, golgi	69.3	69.22
KRH08131	Soybean	nucleus	69.3	69.22
KRH28740	Soybean	nucleus	69.66	69.17
KRH61101	Soybean	nucleus	59.98	69.02
PGSC0003DMT400079498	Potato	vacuole	59.03	68.78
KRH05876	Soybean	nucleus	59.27	68.58
CDY36028	Canola	plastid	57.62	68.54
AT1G45130.1	Thale cress	golgi, vacuole	59.15	68.44
Bra014036.1-P	Field mustard	plastid	57.5	68.4
Solyc01g110000.2.1	Tomato	nucleus	58.68	68.36
Bra036334.1-P	Field mustard	golgi, vacuole	58.91	68.36
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	68.0	68.17
CDY53959	Canola	golgi, vacuole	58.68	68.08
CDY47949	Canola	golgi, vacuole	58.68	68.08
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	67.77	67.93
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	68.48	67.92
VIT_03s0038g00150.t01	Wine grape	vacuole	69.19	67.9
Bra011677.1-P	Field mustard	golgi, vacuole	68.59	67.87
PGSC0003DMT400009496	Potato	nucleus, peroxisome, vacuole	43.21	67.65
Solyc04g080840.1.1	Tomato	extracellular, golgi	58.56	67.48
CDX69219	Canola	vacuole	65.64	67.48
CDX75569	Canola	golgi, vacuole	65.64	67.23
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	67.65	66.94
CDY59693	Canola	vacuole	67.53	66.82
KRH51779	Soybean	vacuole	55.25	65.64
HORVU3Hr1G050450.12	Barley	golgi, vacuole	62.81	64.02
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	53.72	60.91
CDY59725	Canola	cytosol	22.08	59.94
CDY59691	Canola	cytosol, nucleus, vacuole	24.79	59.66
HORVU6Hr1G039490.6	Barley	plastid	52.54	58.25
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	20.78	57.89
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	53.48	52.13
HORVU3Hr1G081970.1	Barley	vacuole	47.46	49.08
HORVU3Hr1G081960.9	Barley	vacuole	49.0	49.05
HORVU2Hr1G057440.2	Barley	vacuole	29.04	46.95
HORVU5Hr1G045820.9	Barley	extracellular, plasma membrane, vacuole	49.82	46.32
HORVU1Hr1G065290.7	Barley	vacuole	44.04	45.38
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	39.79	44.7
HORVU1Hr1G003210.2	Barley	golgi, vacuole	42.03	43.05
HORVU1Hr1G003200.1	Barley	golgi, vacuole	42.03	42.89
HORVU7Hr1G057460.1	Barley	golgi	41.79	42.55
HORVU7Hr1G009630.2	Barley	cytosol	29.04	35.7

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A287PNC9	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU4Hr1G074280	EnsemblPlants:HORVU4Hr1G074280.4	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF51	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B46A170	SEG:seg	:	:	:	:

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A287PNC9]

Coordinates

chrchr4H:-:593638528..593644946

Molecular Weight (calculated)

92642.8 Da

IEP (calculated)

6.738

GRAVY (calculated)

-0.255

Length

847 amino acids

Sequence
(BLAST)

001: MARRWAAAGL LCLAVAAAAA GSVLAAAVDG AVTYDRKAVL INGQRRILFS GSIHYPRSTP EMWEGLIQKA KDGGLDVIQT YVFWNGHEPT PGSYNFEGRY
101: DLVKFIKTAQ KAGLFVHLRI GPYICGEWNF GGFPVWLKYV PGISFRTDNE PFKAAMQGFT EKIVGMMKSE ELFASQGGPI ILSQIENEYG PEEKEFGAAG
201: KSYSDWAAKM AVGLDTGVPW VMCKQEDAPD PVINACNGFY CDAFTPNTPS KPTMWTEAWT GWFTEFGGTI RKRPVEDLSF AVARFVQKGG SFINYYMYHG
301: GTNFGRTAGG PFITTSYDYD APLDEYGLAR EPKYGHLKEL HKAIKLCEQA LVSVDPTVTS LGSMQEAHVY RSPSGCAAFL ANYNSNSHAK IVFDNEHYSL
401: PPWSISILPD CKTVVYNTAT VGVQTSQMQM WSDGASSMMW ERYDEEVGSL AAAPLLTTTG LLEQLNVTRD TSDYLWYMTS VDVSPSEKSL QGGKPLSLTV
501: QSAGHALHIF VNGQLQGSAS GTREDKRISY KGDVKLRAGT NKISLLSVAC GLPNIGVHYE TWNTGVNGPV VLHGLDEGSR DLTWQTWTYQ VGLKGEQMNL
601: NSLEGASSVE WMQGSLIAQN QMPLAWYRAY FDTPSGDEPL ALDMGSMGKG QIWINGQSIG RYSLAYATGD CKDCSYTGSF RAIKCQAGCG QPTQRWYHVP
701: KSWLQPTRNL LVVFEELGGD TSKISLVKRS VSNVCADVSE FHPSIKNWQT ENSGEAKPEL RRSKVHLRCA PGQSISAIKF ASFGTPLGTC GSFEQGQCHS
801: TKSQTVLENC IGKQRCAVTI SPDNFGGDPC PNVMKRVAVE AVCSPGT

Best Arabidopsis Sequence Match ( AT4G36360.2 )
(BLAST)

001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER CVGKARCAVT ISNSNFGKDP CPNVLKRLTV EAVCAPETSV STWRP

Arabidopsis Description

BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.