Factsheet for Bra011677.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36360.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G36360.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75569	Canola	golgi, vacuole	96.14	99.52
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	94.51	94.51
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	28.5	80.26
KRH76716	Soybean	nucleus	78.04	78.68
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	77.57	78.58
KRH28740	Soybean	nucleus	77.8	78.08
KRH69834	Soybean	extracellular, golgi	77.34	78.07
KRH08131	Soybean	nucleus	76.87	77.59
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	75.0	75.98
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	74.65	75.62
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	70.91	71.16
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	71.26	70.28
EER92805	Sorghum	vacuole	68.81	69.95
GSMUA_Achr4P06620_001	Banana	cytosol	52.57	69.88
Os03t0165400-01	Rice	vacuole	67.87	69.08
TraesCS4B01G280900.1	Wheat	golgi, vacuole	68.11	68.99
TraesCS4D01G279400.4	Wheat	vacuole	68.22	68.87
TraesCS4A01G022500.2	Wheat	golgi, vacuole	67.76	68.72
HORVU4Hr1G074280.4	Barley	vacuole	67.87	68.59
Bra036334.1-P	Field mustard	golgi, vacuole	58.29	68.36
Bra014036.1-P	Field mustard	plastid	56.31	67.7
Zm00001d048440_P003	Maize	vacuole	68.22	67.2
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	69.04	64.38
Bra027403.1-P	Field mustard	golgi, vacuole	62.73	64.0
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	51.52	61.94
Bra021506.1-P	Field mustard	vacuole	62.03	61.67
Bra006850.1-P	Field mustard	golgi, vacuole	51.17	60.66
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	51.52	60.25
Bra019120.1-P	Field mustard	golgi, vacuole	49.53	59.55
Bra035634.1-P	Field mustard	golgi, vacuole	50.12	59.42
Bra011946.1-P	Field mustard	golgi, vacuole	53.97	54.67
Bra000493.1-P	Field mustard	golgi, vacuole	53.86	54.62
Bra024238.1-P	Field mustard	golgi, vacuole	43.93	50.74
Bra024237.1-P	Field mustard	vacuole	29.67	50.7
Bra029200.1-P	Field mustard	vacuole	40.65	48.33
Bra002325.1-P	Field mustard	golgi, vacuole	45.91	47.41
Bra021814.1-P	Field mustard	plastid	48.95	46.92
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	38.55	45.08
Bra003128.1-P	Field mustard	extracellular, vacuole	36.57	44.27
Bra001991.1-P	Field mustard	golgi, vacuole	40.3	42.49
Bra011577.1-P	Field mustard	vacuole	41.0	41.54
Bra013052.1-P	Field mustard	golgi, vacuole	40.89	41.37
Bra017687.1-P	Field mustard	vacuole	40.65	41.23
Bra033571.1-P	Field mustard	cytosol	40.3	36.09

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra011677	EnsemblPlants:Bra011677.1	EnsemblPlants:Bra011677.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
UniProt:M4D5C0	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF79	SUPFAM:SSF49785	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0002546B9A
SEG:seg	:	:	:	:	:

Description

AT4G36360 (E=0.0) BGAL3 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding

Coordinates

chrA01:+:1103740..1107785

Molecular Weight (calculated)

95075.0 Da

IEP (calculated)

7.923

GRAVY (calculated)

-0.298

Length

856 amino acids

Sequence
(BLAST)

001: MLRMGTGDTA PRLILWLCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEGLIQK AKDGGVDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMQGF TERIVQLMKS ENLYESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FAVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI REPKYGHLKE LHRAIKMCEK ALVSTDPVVT SLGNKQQAHV YSSESGECSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTSTPNF QWQSYLEDLS SLDDSSTFTT QGLLEQINVT RDTSDYLWYM TSVDIGSTES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYRGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KRDLSWQKWT YQVGLKGEAM
601: NLAYPTNTPS NGWMDASLVA QKSQPLTWHK AYFDAPEGNE PLALDMEGMG KGQVWVNGES IGRYWTAFAT GDCGHCSYTG TYKPNKCLSG CGQPTQRYYH
701: VPRSWLKPSQ NLLVIFEELG GNPSAVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FRRPKVHLKC SPGQAISAIK FASFGTPLGK CGSYQQGECH
801: ATTSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCSPETS ITSWKP

Best Arabidopsis Sequence Match ( AT4G36360.1 )
(BLAST)

001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP

Arabidopsis Description

BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.