Factsheet for Bra021506.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	Bra024839.1-P	AT2G01950.1	19000166
AT3G13750.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51738	Canola	golgi, vacuole	97.1	99.64
Bra027403.1-P	Field mustard	golgi, vacuole	93.5	95.95
AT3G13750.1	Thale cress	golgi, vacuole	92.57	94.1
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	77.58	79.43
KRH10007	Soybean	nucleus	77.0	78.93
KRH44153	Soybean	nucleus	76.42	78.05
KRH23324	Soybean	vacuole	76.07	77.88
Solyc03g121540.2.1	Tomato	nucleus	75.73	77.8
KRH47126	Soybean	nucleus	76.19	77.63
PGSC0003DMT400006654	Potato	golgi, vacuole	75.15	77.21
PGSC0003DMT400083896	Potato	extracellular	74.1	76.41
PGSC0003DMT400012359	Potato	golgi, vacuole	74.33	76.19
Solyc06g062580.2.1	Tomato	nucleus	74.33	76.1
Solyc12g044880.1.1	Tomato	golgi, vacuole	73.52	75.81
GSMUA_Achr7P08970_001	Banana	vacuole	62.37	73.56
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	61.09	71.47
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	60.63	71.12
GSMUA_Achr7P08940_001	Banana	vacuole	60.28	70.9
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	59.93	70.11
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	66.43	69.42
OQU87043	Sorghum	golgi, vacuole	66.32	69.04
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	58.54	68.85
Os01t0580200-01	Rice	golgi, vacuole	65.85	68.56
Zm00001d044290_P005	Maize	golgi, vacuole	65.85	68.31
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	56.21	67.98
TraesCS3A01G208600.1	Wheat	plastid	65.74	67.78
TraesCS3D01G211500.2	Wheat	golgi, vacuole	65.51	67.54
Zm00001d046357_P001	Maize	extracellular	56.45	67.31
HORVU3Hr1G050450.12	Barley	golgi, vacuole	64.92	67.27
TraesCS6A01G185400.1	Wheat	golgi, vacuole	56.56	67.27
TraesCS3B01G235100.1	Wheat	golgi, vacuole	65.27	67.14
TraesCS7D01G359500.1	Wheat	golgi	55.87	67.09
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	55.87	66.99
TraesCS6D01G172400.1	Wheat	golgi, vacuole	56.33	66.9
EER88554	Sorghum	golgi, vacuole	56.21	66.76
TraesCS6B01G214100.1	Wheat	golgi, vacuole	56.21	66.76
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	55.28	66.3
Bra019120.1-P	Field mustard	golgi, vacuole	54.82	66.29
Os02t0219200-01	Rice	peroxisome, vacuole	38.44	66.2
Os06t0573600-01	Rice	plasma membrane, vacuole	54.94	66.15
Bra006850.1-P	Field mustard	golgi, vacuole	55.17	65.79
EES06516	Sorghum	mitochondrion, plastid	56.1	65.27
Bra036334.1-P	Field mustard	golgi, vacuole	55.28	65.21
Bra014036.1-P	Field mustard	plastid	53.66	64.89
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	55.87	64.39
Bra035634.1-P	Field mustard	golgi, vacuole	53.89	64.27
HORVU6Hr1G039490.6	Barley	plastid	56.91	64.14
Bra011677.1-P	Field mustard	golgi, vacuole	61.67	62.03
GSMUA_Achr2P16780_001	Banana	plastid	59.93	61.36
Zm00001d053585_P002	Maize	plastid	54.59	56.69
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	19.16	54.28
Bra000493.1-P	Field mustard	golgi, vacuole	53.08	54.15
Bra011946.1-P	Field mustard	golgi, vacuole	53.08	54.08
Bra024238.1-P	Field mustard	golgi, vacuole	44.95	52.23
Bra024237.1-P	Field mustard	vacuole	28.92	49.7
Bra029200.1-P	Field mustard	vacuole	40.53	48.47
Bra002325.1-P	Field mustard	golgi, vacuole	46.57	48.37
Bra021814.1-P	Field mustard	plastid	49.59	47.82
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	37.86	44.54
Bra003128.1-P	Field mustard	extracellular, vacuole	36.0	43.85
Bra001991.1-P	Field mustard	golgi, vacuole	41.0	43.47
Bra017687.1-P	Field mustard	vacuole	41.46	42.3
Bra011577.1-P	Field mustard	vacuole	41.46	42.25
Bra013052.1-P	Field mustard	golgi, vacuole	41.23	41.96
Bra033571.1-P	Field mustard	cytosol	40.42	36.4

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra021506	EnsemblPlants:Bra021506.1	EnsemblPlants:Bra021506.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M4DYB0	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000254456C	SEG:seg	:	:	:

Description

AT3G13750 (E=5e-314) BGAL1 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding

Coordinates

chrA01:-:24894062..24898362

Molecular Weight (calculated)

95479.3 Da

IEP (calculated)

9.233

GRAVY (calculated)

-0.217

Length

861 amino acids

Sequence
(BLAST)

001: MKNVAMAAAS ALFLLGFLVS LVSASVSYDS RAITINGKRR ILISGSIHYP RSTPEMWPDL IRKAKEGGLD VIQTYVFWNG HEPSPGKYYF EGNYDLVKFV
101: KLVKQSGLYL HLRIGPYVCA EWNFGGFPVW LKYVPGISFR TDNGPFKAQM QRFTTKIVNM MKAERLFESQ GGPIILSQIE NEYGPMEYEL GAPGRSYTNW
201: AAKMAVGLGT GVPWVMCKQD DAPDPIINAC NGFYCDYFSP NKAYKPKMWT EAWTGWFTKF GGPVPYRPAE DMAFSVARFI QKGGSFINYY MVKLKLLSSV
301: LAIQVLIHLF IAQFHGGTNF GRTAGGPFIA TSYDYDAPLD EYGLERQPKW GHLKDLHRAI KLCEPALVSG QLTRIPLGNY QEAHQYKSKS GACSAFLANY
401: NQRSYAKVTF GKNHYNLPPW SISILPDCKN TVYNTARVGA QTSRMKMVRV PVHGGLSWQA YNEDPSSYVD ESFTMVGLVE QINTTRDTSD YLWYMTDVKI
501: NSNEGFLRGG NLPTLTILSA GHAMHVFING QLTGSAYGSL DSPKLTFRRG VNLRAGFNKI AILSIAVGLP NVGPHFETWN AGVLGPVSLN GLNGGRRDLS
601: WQKWTYKVGL RGESLSLHSL SGSSSVEWAE GAFVAQKQPL TWYKTTFSAP AGDSPLAVDM GSMGKGQIWI NGQSVGRHWP AYKAVGTCRE CSYIGTFNEN
701: KCLRNCGEAS QRWYHVPRSW LKPTGNLLVV FEEWGGDPNG ISLVRREVDT VCADIYEWQS TLVNYQLHAS GKVNKPLHPK VHLQCGPGQK ITTVKFASFG
801: TPQGTCGSYR QGSCHAHHSY DAFNRLCVGQ NWCSVTVAPA MFGGDPCPNV MKKLSVEAVC A

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.