Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G359500.1 | Wheat | golgi | 96.66 | 96.79 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 95.96 | 95.96 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 95.82 | 92.1 |
| EER88554 | Sorghum | golgi, vacuole | 87.88 | 87.03 |
| Zm00001d046357_P001 | Maize | extracellular | 87.47 | 86.98 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 84.54 | 84.9 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 81.89 | 81.22 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 71.87 | 70.68 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 71.59 | 70.03 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 71.17 | 69.43 |
| CDX88594 | Canola | golgi, vacuole | 31.06 | 68.62 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 69.92 | 68.58 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 69.92 | 68.21 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 62.12 | 66.57 |
| CDX94367 | Canola | mitochondrion | 64.9 | 65.45 |
| Solyc12g008840.1.1 | Tomato | extracellular | 65.74 | 65.19 |
| CDX76255 | Canola | extracellular | 11.56 | 64.84 |
| Bra019644.1-P | Field mustard | golgi, plastid, vacuole | 63.51 | 64.04 |
| KRH37385 | Soybean | nucleus | 64.07 | 63.8 |
| Bra013956.1-P | Field mustard | cytosol, mitochondrion, plastid, vacuole | 64.76 | 63.52 |
| KRH12385 | Soybean | vacuole | 63.79 | 63.52 |
| CDX92753 | Canola | golgi, vacuole | 62.4 | 62.92 |
| CDX89360 | Canola | mitochondrion | 61.14 | 62.8 |
| AT5G56870.1 | Thale cress | vacuole | 63.23 | 62.71 |
| Bra019120.1-P | Field mustard | golgi, vacuole | 62.12 | 62.64 |
| CDY42755 | Canola | vacuole | 62.12 | 62.64 |
| CDX95380 | Canola | vacuole | 63.37 | 62.59 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 50.97 | 62.24 |
| Bra006850.1-P | Field mustard | golgi, vacuole | 61.98 | 61.63 |
| CDY11899 | Canola | golgi, vacuole | 61.98 | 61.63 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 72.14 | 61.59 |
| AT4G26140.7 | Thale cress | vacuole | 64.21 | 61.22 |
| CDY32919 | Canola | golgi, vacuole | 60.45 | 60.11 |
| Bra035634.1-P | Field mustard | golgi, vacuole | 60.45 | 60.11 |
| CDY20708 | Canola | golgi, vacuole | 60.31 | 59.97 |
| TraesCS3A01G208600.1 | Wheat | plastid | 68.38 | 58.8 |
| KRH44153 | Soybean | nucleus | 67.69 | 57.65 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 62.53 | 57.49 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 67.27 | 57.43 |
| KRH47126 | Soybean | nucleus | 67.55 | 57.4 |
| KRH10007 | Soybean | nucleus | 67.13 | 57.38 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 66.99 | 57.33 |
| CDY23637 | Canola | golgi, vacuole | 66.99 | 57.33 |
| KRH23324 | Soybean | vacuole | 66.99 | 57.19 |
| CDX97513 | Canola | golgi, vacuole | 66.85 | 57.14 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 66.99 | 56.79 |
| CDY69471 | Canola | cytosol | 32.87 | 56.73 |
| CDY51738 | Canola | golgi, vacuole | 66.16 | 56.62 |
| Solyc03g121540.2.1 | Tomato | nucleus | 65.88 | 56.44 |
| CDY37486 | Canola | golgi, vacuole | 65.74 | 56.26 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 65.6 | 56.21 |
| CDY70594 | Canola | cytosol | 32.45 | 56.01 |
| Solyc06g062580.2.1 | Tomato | nucleus | 65.6 | 56.0 |
| PGSC0003DMT400083896 | Potato | extracellular | 65.04 | 55.93 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 65.04 | 55.93 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 65.32 | 55.83 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 65.04 | 55.66 |
| KRH02714 | Soybean | golgi, vacuole | 64.9 | 55.54 |
| Bra021506.1-P | Field mustard | vacuole | 66.3 | 55.28 |
| VIT_11s0016g02200.t01 | Wine grape | vacuole | 64.07 | 55.02 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 62.26 | 52.96 |
| TraesCS4A01G083700.3 | Wheat | extracellular | 54.46 | 45.84 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 27.58 | 44.3 |
| TraesCS3A01G386300.1 | Wheat | golgi, vacuole | 51.11 | 43.64 |
| TraesCS3A01G386200.1 | Wheat | vacuole | 51.11 | 43.48 |
| TraesCS5A01G143600.4 | Wheat | plasma membrane | 51.95 | 40.94 |
| TraesCS1A01G024100.1 | Wheat | vacuole | 47.08 | 40.82 |
| TraesCS1A01G267700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.57 | 38.84 |
| TraesCS3A01G386100.3 | Wheat | vacuole | 41.78 | 36.1 |
| TraesCS7A01G272400.2 | Wheat | vacuole | 42.76 | 35.99 |
| TraesCS5A01G330900.1 | Wheat | endoplasmic reticulum, vacuole | 39.69 | 33.97 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | InterPro:BetaGal_jelly_roll_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat |
| InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | PFAM:PF01301 | PFAM:PF13364 |
| PRINTS:PR00742 | ScanProsite:PS01182 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF120 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7A01G363600 | EnsemblPlants:TraesCS7A01G363600.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:538342924..538346457
Molecular Weight (calculated)
78338.5 Da
IEP (calculated)
8.343
GRAVY (calculated)
-0.223
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSGGAGVLL LALIAAAAVV ANAAVTYDHR AVVINGRRRI LMSGSIHYPR STPEMWPDLI QKAKDGGLDV VQTYVFWNGH EPARGQYHFA DRYDLVRFVK
101: LAGQAGLFVH LRIGPYVCAE WNFGGFPVWL KYVPGISFRT DNGPFKAEMQ RFVEKIVSMM KSEGLFEWQG GPIILAQVEN EYGPMESAMG AGAKPYASWA
201: ANMAVATGAG VPWVMCKQDD APDPVINTCN GFYCDYFSPN SNGKPTMWTE AWTGWFTAFG GPVPHRPVED MAFAVARFVQ KGGSFVNYYM YHGGTNFDRT
301: AGGPFIATSY DYDAPIDEYG LIRQPKWGHL RDLHKAIKQA EPALVSGDPT VQRIGNYEKA YVFKSSAGAC AAFLSNYHTS AAARVVYNGR RYDLPAWSIS
401: ILPDCKTAVF NTATVKEPSA PAKMNPAGGL AWQSYSEDTN ALDSSAFTKD GLVEQLSMTW DKSDYLWYTT YVNIDSSEQF LKSGQWPQLT INSAGHSVQV
501: FVNGQSFGVA YGGYNNPKLT YSKPVKMWQG SNKISILSSA MGLPNQGTHY EAWNVGVLGP VTLSGLNQGK RDLSNQKWTY QIGLKGESLG VNSVSGSSSV
601: EWGSATGAQP LTWHKAYFAA PAGSAPVALD MGSMGKGQIW VNGNNAGRYW SYRASGSCGA CSYAGTFSEA KCQTNCGDIS QRWYHVPRSW LKPSGNLLVV
701: LEEFGGDLSG VTLMTRTT
101: LAGQAGLFVH LRIGPYVCAE WNFGGFPVWL KYVPGISFRT DNGPFKAEMQ RFVEKIVSMM KSEGLFEWQG GPIILAQVEN EYGPMESAMG AGAKPYASWA
201: ANMAVATGAG VPWVMCKQDD APDPVINTCN GFYCDYFSPN SNGKPTMWTE AWTGWFTAFG GPVPHRPVED MAFAVARFVQ KGGSFVNYYM YHGGTNFDRT
301: AGGPFIATSY DYDAPIDEYG LIRQPKWGHL RDLHKAIKQA EPALVSGDPT VQRIGNYEKA YVFKSSAGAC AAFLSNYHTS AAARVVYNGR RYDLPAWSIS
401: ILPDCKTAVF NTATVKEPSA PAKMNPAGGL AWQSYSEDTN ALDSSAFTKD GLVEQLSMTW DKSDYLWYTT YVNIDSSEQF LKSGQWPQLT INSAGHSVQV
501: FVNGQSFGVA YGGYNNPKLT YSKPVKMWQG SNKISILSSA MGLPNQGTHY EAWNVGVLGP VTLSGLNQGK RDLSNQKWTY QIGLKGESLG VNSVSGSSSV
601: EWGSATGAQP LTWHKAYFAA PAGSAPVALD MGSMGKGQIW VNGNNAGRYW SYRASGSCGA CSYAGTFSEA KCQTNCGDIS QRWYHVPRSW LKPSGNLLVV
701: LEEFGGDLSG VTLMTRTT
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.