Factsheet for AT5G56870.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88594	Canola	golgi, vacuole	42.54	94.77
Bra006850.1-P	Field mustard	golgi, vacuole	91.57	91.83
CDY11899	Canola	golgi, vacuole	90.88	91.14
CDY70594	Canola	cytosol	51.52	89.66
CDY69471	Canola	cytosol	51.24	89.18
CDY32919	Canola	golgi, vacuole	88.54	88.78
Bra035634.1-P	Field mustard	golgi, vacuole	88.12	88.37
CDY20708	Canola	golgi, vacuole	87.98	88.23
AT4G26140.7	Thale cress	vacuole	81.77	78.62
AT3G52840.2	Thale cress	golgi, vacuole	78.45	72.73
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	65.47	70.75
KRH37385	Soybean	nucleus	69.48	69.76
Solyc12g008840.1.1	Tomato	extracellular	69.75	69.75
KRH12385	Soybean	vacuole	69.06	69.35
GSMUA_Achr7P08970_001	Banana	vacuole	67.13	66.58
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	66.85	65.94
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	66.85	65.76
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	66.16	65.08
Os06t0573600-01	Rice	plasma membrane, vacuole	63.81	64.62
GSMUA_Achr7P08940_001	Banana	vacuole	65.19	64.48
Zm00001d046357_P001	Maize	extracellular	63.81	63.99
EER88554	Sorghum	golgi, vacuole	63.95	63.86
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	63.26	63.79
TraesCS7D01G359500.1	Wheat	golgi	63.12	63.74
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	62.71	63.23
TraesCS6A01G185400.1	Wheat	golgi, vacuole	62.71	62.71
TraesCS6D01G172400.1	Wheat	golgi, vacuole	62.57	62.48
TraesCS6B01G214100.1	Wheat	golgi, vacuole	62.29	62.21
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	63.54	61.58
EES06516	Sorghum	mitochondrion, plastid	62.71	61.35
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	70.72	61.02
Os02t0219200-01	Rice	peroxisome, vacuole	42.13	61.0
KRH02714	Soybean	golgi, vacuole	70.17	60.55
HORVU6Hr1G039490.6	Barley	plastid	62.71	59.42
VIT_11s0016g02200.t01	Wine grape	vacuole	68.51	59.33
AT1G45130.1	Thale cress	golgi, vacuole	59.94	59.29
GSMUA_Achr2P16780_001	Banana	plastid	67.54	58.15
AT3G13750.1	Thale cress	golgi, vacuole	66.99	57.26
OQU87043	Sorghum	golgi, vacuole	64.5	56.47
Zm00001d044290_P005	Maize	golgi, vacuole	64.5	56.27
Os01t0580200-01	Rice	golgi, vacuole	64.09	56.11
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	63.54	55.83
HORVU3Hr1G050450.12	Barley	golgi, vacuole	63.67	55.48
TraesCS3A01G208600.1	Wheat	plastid	63.81	55.33
TraesCS3D01G211500.2	Wheat	golgi, vacuole	63.54	55.09
TraesCS3B01G235100.1	Wheat	golgi, vacuole	63.4	54.84
Zm00001d053585_P002	Maize	plastid	62.43	54.52
AT5G63810.1	Thale cress	golgi, vacuole	53.73	52.5
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	59.94	50.7
AT5G63800.1	Thale cress	vacuole	46.41	46.8
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	28.73	46.53
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	54.7	46.48
AT1G31740.1	Thale cress	vacuole	46.27	43.0
AT2G32810.1	Thale cress	golgi, vacuole	51.52	42.05
AT5G20710.1	Thale cress	vacuole	47.79	41.89
AT1G77410.3	Thale cress	golgi, vacuole	45.99	40.61
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	42.82	36.56
AT4G35010.1	Thale cress	vacuole	41.3	35.38
AT4G38590.2	Thale cress	golgi, vacuole	41.02	28.23

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:835789	ProteinID:AED96817.1	EMBL:AJ270300	EMBL:AK222026
ArrayExpress:AT5G56870	EnsemblPlantsGene:AT5G56870	RefSeq:AT5G56870	TAIR:AT5G56870	RefSeq:AT5G56870-TAIR-G	EnsemblPlants:AT5G56870.1
TAIR:AT5G56870.1	EMBL:AY054589	EMBL:AY064690	ProteinID:BAA97206.1	Symbol:BGAL4	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0048046	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	RefSeq:NP_200498.1
PFAM:PF01301	PO:PO:0000003	PO:PO:0000013	PO:PO:0000014	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001185	PO:PO:0006339
PO:PO:0006340	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0009001	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS51257	PANTHER:PTHR23421	PANTHER:PTHR23421:SF63	UniProt:Q9SCV8	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000009E6FF	SEG:seg	:	:

Description

BGAL4Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8]

Coordinates

chr5:+:23003909..23009672

Molecular Weight (calculated)

80595.3 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.238

Length

724 amino acids

Sequence
(BLAST)

001: MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS
401: VSILPDCKTE VYNTAKVNAP SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS GETFLKTGDS PLLTVMSAGH
501: ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE
601: SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK
701: SQNLIVVFEE LGGDPNGISL VKRT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.