Factsheet for VIT_11s0016g02200.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	76.91	76.64
KRH02714	Soybean	golgi, vacuole	76.67	76.4
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	60.89	75.97
KRH12385	Soybean	vacuole	64.71	75.03
Solyc12g008840.1.1	Tomato	extracellular	64.95	75.0
KRH37385	Soybean	nucleus	64.0	74.2
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	73.8	73.36
CDX88594	Canola	golgi, vacuole	28.47	73.23
GSMUA_Achr7P08970_001	Banana	vacuole	61.84	70.82
CDX94367	Canola	mitochondrion	60.29	70.79
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	59.33	69.66
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	37.08	69.35
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	60.53	68.94
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	60.65	68.89
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	60.17	68.72
CDX76254	Canola	golgi, nucleus, vacuole	48.33	68.71
CDY11899	Canola	golgi, vacuole	59.33	68.7
CDX92753	Canola	golgi, vacuole	58.49	68.68
AT4G26140.7	Thale cress	vacuole	61.72	68.53
AT5G56870.1	Thale cress	vacuole	59.33	68.51
CDX95380	Canola	vacuole	59.57	68.5
Bra006850.1-P	Field mustard	golgi, vacuole	58.97	68.28
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	59.93	68.07
GSMUA_Achr7P08940_001	Banana	vacuole	59.57	68.03
Bra019120.1-P	Field mustard	golgi, vacuole	57.89	67.98
CDY42755	Canola	vacuole	57.78	67.84
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	66.75	67.72
Os01t0580200-01	Rice	golgi, vacuole	66.27	66.99
CDX89360	Canola	mitochondrion	55.98	66.95
OQU87043	Sorghum	golgi, vacuole	66.03	66.75
CDX76255	Canola	extracellular	10.17	66.41
Zm00001d044290_P005	Maize	golgi, vacuole	65.91	66.39
CDY32919	Canola	golgi, vacuole	56.94	65.93
HORVU3Hr1G050450.12	Barley	golgi, vacuole	65.43	65.82
Bra035634.1-P	Field mustard	golgi, vacuole	56.58	65.51
CDY20708	Canola	golgi, vacuole	56.46	65.37
TraesCS3D01G211500.2	Wheat	golgi, vacuole	65.19	65.27
TraesCS3A01G208600.1	Wheat	plastid	64.95	65.03
TraesCS3B01G235100.1	Wheat	golgi, vacuole	64.95	64.87
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	55.62	64.76
Zm00001d046357_P001	Maize	extracellular	55.74	64.54
TraesCS7D01G359500.1	Wheat	golgi	55.26	64.44
Os06t0573600-01	Rice	plasma membrane, vacuole	55.02	64.34
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	65.67	64.29
CDY69471	Canola	cytosol	31.94	64.18
AT3G52840.2	Thale cress	golgi, vacuole	59.93	64.15
EER88554	Sorghum	golgi, vacuole	55.62	64.14
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	55.02	64.07
CDY70594	Canola	cytosol	31.82	63.94
TraesCS6A01G185400.1	Wheat	golgi, vacuole	55.14	63.67
TraesCS6B01G214100.1	Wheat	golgi, vacuole	54.9	63.31
TraesCS6D01G172400.1	Wheat	golgi, vacuole	54.9	63.31
Os02t0219200-01	Rice	peroxisome, vacuole	37.68	63.0
EES06516	Sorghum	mitochondrion, plastid	55.62	62.84
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	63.4	62.72
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	55.5	62.12
GSMUA_Achr2P16780_001	Banana	plastid	61.72	61.36
VIT_03s0038g00150.t01	Wine grape	vacuole	63.04	61.07
HORVU6Hr1G039490.6	Barley	plastid	55.62	60.86
VIT_06s0004g03020.t01	Wine grape	extracellular	56.94	56.26
Zm00001d053585_P002	Maize	plastid	54.67	55.13
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	28.71	52.06
VIT_07s0031g02480.t01	Wine grape	extracellular	51.2	50.53
VIT_18s0001g02220.t01	Wine grape	vacuole	46.89	48.22
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	46.17	47.02
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	46.77	46.94
VIT_11s0016g00680.t01	Wine grape	vacuole	46.53	46.59
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	44.62	44.78

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100259328
wikigene:100259328	Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	ProteinID:CCB51445
ProteinID:CCB51445.1	UniProt:F6HGW2	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	EntrezGene:LOC100259328	wikigene:LOC100259328
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TIGR:TC53602
TIGR:TC70823	TMHMM:TMhelix	UniParc:UPI00015C8933	ArrayExpress:VIT_11s0016g02200	EnsemblPlantsGene:VIT_11s0016g02200	EnsemblPlants:VIT_11s0016g02200.t01
unigene:Vvi.3331	RefSeq:XP_002282132	RefSeq:XP_002282132.1	:	:	:

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:F6HGW2]

Coordinates

chr11:-:1800943..1807928

Molecular Weight (calculated)

92262.9 Da

IEP (calculated)

7.597

GRAVY (calculated)

-0.239

Length

836 amino acids

Sequence
(BLAST)

001: MWSMLRGSLV VFILIFSWVS HGSASVTYDK RSFIINGQRK ILISGSIHYP RSTPEMWPDL IQKAKDGGLD VIQTYVFWNG HEPSRGKYYF EGRYDLVRFI
101: KVVQAAGLYV HLRIGPYICA EWNFGGFPVW LKYVPGIAFR TDNGPFKVAM QGFTQKIVDM MKSEKLFQPQ GGPIIMSQIE NEYGPVEYEI GAPGKAYTKW
201: AAEMAVQLGT GVPWVMCKQE DAPDPVIDAC NGFYCENFFP NKDYKPKMFT EAWTGWYTEF GGAIPNRPAE DLAYSVARFI QNRGSFINYY MYHGGTNFGR
301: TAGGPFISTS YDYDAPIDEY GLPSEPKWGH LRDLHKAIKL CEPALVSADP TVTYLGTNLE AHVYKAKSGA CAAFLANYDP KSSAKVTFGN TQYDLPPWSV
401: SILPDCKNVV FNTARIGAQS SQMKMNPVST FSWQSYNEET ASAYTEDTTT MDGLLEQINI TRDTTDYLWY MTEVHIKPDE GFLKTGQYPV LTVMSAGHAL
501: HVFINGQLSG TVYGELSNPK VTFSDNVKLT VGTNKISLLS VAMGLPNVGL HFETWNAGVL GPVTLKGLNE GTVDMSSWKW SYKIGLKGEA LNLQAITGSS
601: SDEWVEGSLL AQKQPLTWYK TTFNAPGGND PLALDMSSMG KGQIWINGES IGRHWPAYTA HGNCNGCNYA GIFNDKKCQT GCGGPSQRWY HVPRSWLKPS
701: GNQLIVFEEL GGNPAGITLV KRTMDRVCAD IFEGQPSLKN SQIIGSSKVN SLQSKAHLWC APGLKISKIQ FASFGVPQGT CGSFREGSCH AHKSYDALQR
801: NCIGKQSCSV SVAPEVFGGD PCPGSMKKLS VEALCS

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.