Factsheet for VIT_07s0031g02480.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

extracellular: 26106900

msms PMID: 26106900 doi

C Guillier, M Gamm, G Lucchi, C Truntzer, D Pecqueur, P Ducoroy, M Adrian, MC Héloir

Clinical Innovation Proteomic Platform - CLIPP, 15 Boulevard Maréchal de Lattre de Tassigny, BP37013, F-21070 Dijon cedex, France., CNRS, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;, Université de Bourgogne, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63980	Soybean	vacuole	74.26	74.61
KRH53957	Soybean	nucleus	74.14	74.32
PGSC0003DMT400039333	Potato	extracellular, golgi	70.13	71.05
Solyc03g019890.2.1	Tomato	nucleus	72.61	70.69
CDY43757	Canola	golgi, vacuole	60.8	69.5
Bra024238.1-P	Field mustard	golgi, vacuole	60.68	69.37
CDX84446	Canola	golgi, vacuole	60.68	69.37
AT5G63810.1	Thale cress	golgi, vacuole	60.33	68.96
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	60.68	67.63
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	65.05	65.36
TraesCS3B01G418400.2	Wheat	vacuole	64.94	65.17
TraesCS3A01G386300.1	Wheat	golgi, vacuole	64.58	65.04
TraesCS3D01G379300.2	Wheat	vacuole	64.7	64.93
TraesCS3D01G379200.1	Wheat	vacuole	64.34	64.57
TraesCS3A01G386200.1	Wheat	vacuole	64.23	64.45
HORVU3Hr1G081960.9	Barley	vacuole	64.11	64.18
HORVU3Hr1G081970.1	Barley	vacuole	61.51	63.61
TraesCS3B01G418300.2	Wheat	vacuole	63.28	62.47
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	61.98	60.62
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	65.41	60.28
VIT_06s0004g03020.t01	Wine grape	extracellular	53.6	53.66
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	28.93	53.15
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	52.89	53.02
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	52.07	52.44
VIT_11s0016g02200.t01	Wine grape	vacuole	50.53	51.2
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	51.0	50.59
VIT_03s0038g00150.t01	Wine grape	vacuole	51.48	50.52
VIT_18s0001g02220.t01	Wine grape	vacuole	45.69	47.6
VIT_11s0016g00680.t01	Wine grape	vacuole	46.52	47.19
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	45.34	46.77
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	44.39	45.14
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	44.04	44.78

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100254367
wikigene:100254367	Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80
ProteinID:CBI21600	ProteinID:CBI21600.3	UniProt:D7SWF1	EMBL:FN595233	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0009628	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
GO:GO:0080167	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	EntrezGene:LOC100254367	wikigene:LOC100254367	InterPro:Lectin_gal-bd_dom	PFAM:PF01301
PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF67
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0001BE2078	ArrayExpress:VIT_07s0031g02480	EnsemblPlantsGene:VIT_07s0031g02480
EnsemblPlants:VIT_07s0031g02480.t01	unigene:Vvi.17905	RefSeq:XP_003632537	RefSeq:XP_003632537.1	SEG:seg	:

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:D7SWF1]

Coordinates

chr7:-:18628733..18651398

Molecular Weight (calculated)

94941.1 Da

IEP (calculated)

7.431

GRAVY (calculated)

-0.341

Length

847 amino acids

Sequence
(BLAST)

001: MPHLKLFFLL LSIFFTSSLA ANVTYDRRSL IIDGQRKLLI SASIHYPRSV PGMWPGLVKT AKEGGIDVIE TYVFWNGHEL SPDNYYFGGR YDLLKFVKIV
101: QQARMYLILR VGPFVAAEWN FGGVPVWLHY VPGTVFRTNS EPFKYHMQKF MTLIVNIMKK EKLFASQGGP IILAQVENEY GDTERIYGDG GKPYAMWAAN
201: MALSQNIGVP WIMCQQYDAP DPVINTCNSF YCDQFTPNSP NKPKMWTENW PGWFKTFGAP DPHRPHEDIA FSVARFFQKG GSLQNYYMYH GGTNFGRTSG
301: GPFITTSYDY NAPIDEYGLA RLPKWGHLKE LHRAIKSCEH VLLYGEPINL SLGPSQEVDV YTDSSGGCAA FISNVDEKED KIIVFQNVSY HVPAWSVSIL
401: PDCKNVVFNT AKVGSQTSQV EMVPEELQPS LVPSNKDLKG LQWETFVEKA GIWGEADFVK NGFVDHINTT KDTTDYLWYT VSLTVGESEN FLKEISQPVL
501: LVESKGHALH AFVNQKLQGS ASGNGSHSPF KFECPISLKA GKNDIALLSM TVGLQNAGPF YEWVGAGLTS VKIKGLNNGI MDLSTYTWTY KIGLQGEHLL
601: IYKPEGLNSV KWLSTPEPPK QQPLTWYKAV VDPPSGNEPI GLDMVHMGKG LAWLNGEEIG RYWPRKSSIH DKCVQECDYR GKFMPNKCST GCGEPTQRWY
701: HVPRSWFKPS GNILVIFEEK GGDPTKIRFS RRKTTGVCAL VSEDHPTYEL ESWHKDANEN NKNKATIHLK CPENTHISSV KFASYGTPTG KCGSYSQGDC
801: HDPNSASVVE KLCIRKNDCA IELAEKNFSK DLCPSTTKKL AVEAVCS

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.