Factsheet for TraesCS3B01G418300.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G379200.1	Wheat	vacuole	93.47	95.02
TraesCS3A01G386200.1	Wheat	vacuole	93.01	94.55
HORVU3Hr1G081970.1	Barley	vacuole	87.18	91.33
TraesCS3B01G418400.2	Wheat	vacuole	84.15	85.55
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	77.51	78.88
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	74.13	73.44
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	77.27	72.14
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	56.76	64.08
VIT_07s0031g02480.t01	Wine grape	extracellular	62.47	63.28
KRH53957	Soybean	nucleus	61.42	62.37
KRH63980	Soybean	vacuole	60.84	61.92
AT5G63810.1	Thale cress	golgi, vacuole	51.63	59.78
CDY43757	Canola	golgi, vacuole	51.63	59.78
Bra024238.1-P	Field mustard	golgi, vacuole	51.52	59.65
CDX84446	Canola	golgi, vacuole	51.4	59.51
PGSC0003DMT400039333	Potato	extracellular, golgi	56.99	58.49
Solyc03g019890.2.1	Tomato	nucleus	58.86	58.05
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	42.19	50.42
TraesCS6B01G214100.1	Wheat	golgi, vacuole	41.72	49.38
TraesCS4B01G220500.1	Wheat	golgi	49.07	49.36
TraesCS4B01G280900.1	Wheat	golgi, vacuole	48.02	48.76
TraesCS3B01G235100.1	Wheat	golgi, vacuole	47.32	48.51
TraesCS5B01G142600.1	Wheat	unclear	44.99	42.37
TraesCS1B01G030400.1	Wheat	vacuole	40.44	41.76
TraesCS1B01G278400.1	Wheat	plastid	39.39	41.02
TraesCS5B01G331300.1	Wheat	golgi, vacuole	39.51	40.41
TraesCS3B01G418200.1	Wheat	vacuole	38.93	40.1
TraesCS7B01G169700.1	Wheat	vacuole	40.56	39.95

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF67	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G418300	EnsemblPlants:TraesCS3B01G418300.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:655291413..655297144

Molecular Weight (calculated)

95310.5 Da

IEP (calculated)

7.391

GRAVY (calculated)

-0.338

Length

858 amino acids

Sequence
(BLAST)

001: MATAAGRLLP LLLLLHALLV VAAAAVSGVT YDHRSLIISG RRRLLISTSI HYPRSVPAMW PKLVAEAKDG GADCIETYVF WNGHETAPGK FARVVKDAGL
101: FLILRIGPFV AGEWNFGSDS FPYIFTVILF LWCTCQPFLE DFRGLPVWLH YIPGTVFRTN NEPFKSHMKS FTTKIVDMMK KERFFASQGG HIILAQIENE
201: YEGTEQAYGA GGKAYAAWAA SMALAQNTGV PWIMCQQSDA PDHVINTCNS FYCDQFTPNS PTKPKIWTEN WPGWFQNFGE ANPHRPPEDV AFSVARFFGK
301: GGTVQNYYVY HGGTNFGRTT GGPFITTSYD YDAPIDEYGL RRLPKWAHLR ELHKSIKLCE HSLLYGNSTS FSLGPQQEAD VYTDHSGGCV AFLSNIDSEK
401: DKVVTFRKRK YDLPAWSVSI LPDCKSVVYN TAKVRSQTSI VDMAPETLQS SKPEQWSIFT EKIGIWDKND FIRNGFVDHI NTTKDSTDYL WHTTSFKVDT
501: SYPASGKHPI LNIDSKGHGV HAFLNDMLVG SAFGNGSKSS FSVQMPINLK TGKNEIALLS MTVGLQNAGA RYEWVGAGLT TVNISGMENG TIDLSSNNWA
601: YKIGLEGERY SLFKPDQGNN QRWRQQSEPP KDQPLTWYKV NVDVPQGDDP IGLDMQSMGK GLAWLNGNAI GRYWLRTSSS DDRCTPNCNY RGQFSPNNCR
701: TGCGKPTQRW YHVPRSWFHP SENTLVVFEE QGGDPTKITF SRRVATSVCS FVSENYPSIA DMETWDKNMS DDGVASEAQL SCPKGKIISS VNFASFGDPS
801: GTCRSYQQGS CHHPDSLSVV KKACLNNNGC TISLADRGFG KDLCPGVIKT LAIEVDCS

Best Arabidopsis Sequence Match ( AT2G28470.1 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.