Factsheet for TraesCS3B01G418400.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G379300.2	Wheat	vacuole	96.68	96.68
TraesCS3A01G386300.1	Wheat	golgi, vacuole	95.97	96.31
HORVU3Hr1G081960.9	Barley	vacuole	95.62	95.39
TraesCS3B01G418300.2	Wheat	vacuole	85.55	84.15
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	81.28	81.38
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	77.25	75.29
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	81.4	74.76
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	59.48	66.05
VIT_07s0031g02480.t01	Wine grape	extracellular	65.17	64.94
KRH53957	Soybean	nucleus	64.81	64.73
KRH63980	Soybean	vacuole	64.34	64.41
CDY43757	Canola	golgi, vacuole	54.03	61.54
AT5G63810.1	Thale cress	golgi, vacuole	53.91	61.4
Bra024238.1-P	Field mustard	golgi, vacuole	53.91	61.4
CDX84446	Canola	golgi, vacuole	53.79	61.27
PGSC0003DMT400039333	Potato	extracellular, golgi	59.83	60.41
Solyc03g019890.2.1	Tomato	nucleus	61.97	60.11
TraesCS4B01G220500.1	Wheat	golgi	51.54	51.0
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	43.36	50.97
TraesCS6B01G214100.1	Wheat	golgi, vacuole	43.25	50.34
TraesCS3B01G235100.1	Wheat	golgi, vacuole	49.64	50.06
TraesCS4B01G280900.1	Wheat	golgi, vacuole	49.53	49.47
TraesCS5B01G142600.1	Wheat	unclear	46.68	43.25
TraesCS1B01G030400.1	Wheat	vacuole	42.42	43.08
TraesCS1B01G278400.1	Wheat	plastid	40.76	41.75
TraesCS3B01G418200.1	Wheat	vacuole	40.28	40.82
TraesCS7B01G169700.1	Wheat	vacuole	41.94	40.64
TraesCS5B01G331300.1	Wheat	golgi, vacuole	40.05	40.29

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF67	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G418400	EnsemblPlants:TraesCS3B01G418400.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:655303521..655309817

Molecular Weight (calculated)

93797.5 Da

IEP (calculated)

6.900

GRAVY (calculated)

-0.361

Length

844 amino acids

Sequence
(BLAST)

001: MAAAAGPRLL PLLLLLHPLL LVAAAAASGV TYDHRSLVIS GRRRLLISAS IHYPRSVPAM WPKLLAEAKD GGADCIETYV FWNGHETAPG KYYFEDRFDL
101: VQFARVVKDA GLFLMLRIGP FVAAEWNFGG VPAWLHYIPG TVFRTNNEPF KSHMKSFTTK IVDMMKEERF FASQGGHIIL AQIENEYGYY QQAYGAGGKA
201: YAMWAGSMAL AQNTGVPWIM CQQYDVPDHV INTCNSFYCD QFKPNSPTQP KIWTENWPGW FQTFGESNPH RPPEDVAFSV ARFFGKGGSV QNYYVYHGGT
301: NFDRTSGGPF ITTSYDYDAP IDEYGLRRLP KWAHLKELHK SIKLCEHSLL FGNSTSLSLG PQQEADVYTD HSGGCVAFLA NIDSEKDKVV TFRNRQYDLP
401: AWSVSILPDC KNVVFNTAKV RSQTLMVDMV PETLQASKSD QWSIFTERIG IWDKNDFVRN EFVDHINTTK DSTDYLWHTT SFDVDRNYPA TGNHPVLNIG
501: SKGHAVHAFL NNMLIGSAYG NGSESSFSVH MPINLKAGKN EIALLSMTVG LKSAGPYYEW VGAGLTSVNI SGIKNGTMDL SSNNWAYKIG LEGEHYSLFK
601: PDQGNNQRWR PEPEPPKHQP LTWYKVNVDV PQGDDPVGLD MQSMGKGLVW LNGNAIGRYW PRTSPTDDRC TPSCDYRGKF SPNKCRVGCG KPTQRWYHVP
701: RSWFHPSGNT LVVFEEQGGD PTKITFSRRV AASVCSFVSE NYPSIDLESW DKSISDDNPV AAKVELSCPK GKNISSVKFA SFGDPSGTCR SYQQGSCHHS
801: GSLSVVEKAC LNINSCTVSL SDEGFGEDPC PGVTKTLAIE ADCS

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.