Factsheet for Os01t0875500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, vacuole

Predictor Summary:

nucleus 2
golgi 1
vacuole 1
extracellular 1
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G379300.2	Wheat	vacuole	74.76	81.4
TraesCS3B01G418400.2	Wheat	vacuole	74.76	81.4
TraesCS3A01G386300.1	Wheat	golgi, vacuole	74.32	81.21
HORVU3Hr1G081960.9	Barley	vacuole	74.54	80.97
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	73.99	80.66
TraesCS3D01G379200.1	Wheat	vacuole	73.23	79.74
TraesCS3A01G386200.1	Wheat	vacuole	72.47	78.91
HORVU3Hr1G081970.1	Barley	vacuole	68.99	77.41
TraesCS3B01G418300.2	Wheat	vacuole	72.14	77.27
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	70.51	74.83
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	55.6	67.24
VIT_07s0031g02480.t01	Wine grape	extracellular	60.28	65.41
KRH53957	Soybean	nucleus	58.32	63.43
KRH63980	Soybean	vacuole	57.89	63.11
CDY43757	Canola	golgi, vacuole	49.51	61.4
Bra024238.1-P	Field mustard	golgi, vacuole	49.4	61.27
CDX84446	Canola	golgi, vacuole	49.18	61.0
AT5G63810.1	Thale cress	golgi, vacuole	49.18	61.0
PGSC0003DMT400039333	Potato	extracellular, golgi	54.95	60.41
Solyc03g019890.2.1	Tomato	nucleus	56.8	60.0
Os06t0573600-01	Rice	plasma membrane, vacuole	40.91	52.59
Os06t0628500-00	Rice	extracellular, golgi, vacuole	16.76	52.38
Os01t0580200-01	Rice	golgi, vacuole	46.46	51.63
Os03t0165400-01	Rice	vacuole	45.92	50.18
Os02t0219200-01	Rice	peroxisome, vacuole	25.9	47.6
Os03t0255100-01	Rice	extracellular	48.75	46.86
Os09t0539200-01	Rice	vacuole	22.31	45.96
Os10t0330600-01	Rice	extracellular	40.7	45.17
Os05t0428100-00	Rice	golgi, vacuole	39.28	44.51
Os10t0340600-01	Rice	extracellular, golgi, vacuole	40.04	44.44
Os12t0429200-01	Rice	plasma membrane	43.96	43.96
Os08t0549200-01	Rice	plasma membrane	39.28	42.57

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4324777	EMBL:AK102715
UniProt:B7ETJ0	ProteinID:BAS75497.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009628	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0080167	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	EnsemblPlantsGene:Os01g0875500
EnsemblPlants:Os01t0875500-01	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF67	SUPFAM:SSF49785	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI000188AE74	RefSeq:XP_015620882.1
SEG:seg	:	:	:	:	:

Description

BETA-GALACTOSIDASE 4Similar to Beta-galactosidase (EC 3.2.1.23). (Os01t0875500-01);Similar to cDNA clone:J033105C09, full insert sequence. (Os01t0875500-02)

Coordinates

chr1:+:37994513..38000988

Molecular Weight (calculated)

102516.0 Da

IEP (calculated)

8.347

GRAVY (calculated)

-0.421

Length

919 amino acids

Sequence
(BLAST)

001: MGRPHRRRDC GHGAAHRERC RIQSKQLHST VPTPPARRLP PHAILYHHHH HRVVLAHTPY RPPPSTAAMA GASSYFSLRR LLLLLLPLVP LLGATTAAAA
101: GANSSVTYDH RSLIISGRRR LLISTSIHYP RSVPEMWPKL VAEAKDGGAD CVETYVFWNG HEPAQGQYYF EERFDLVRFA KIVKDAGLYM ILRIGPFVAA
201: EWTFGGVPVW LHYAPGTVFR TNNEPFKSHM KRFTTYIVDM MKKEQFFASQ GGHIILAQVE NEYGDMEQAY GAGAKPYAMW AASMALAQNT GVPWIMCQQY
301: DAPDPVINTC NSFYCDQFKP NSPTKPKFWT ENWPGWFQTF GESNPHRPPE DVAFSVARFF GKGGSLQNYY VYHGGTNFGR TTGGPFITTS YDYDAPIDEY
401: GLRRLPKWAH LRDLHKSIKL GEHTLLYGNS SFVSLGPQQE ADVYTDQSGG CVAFLSNVDS EKDKVVTFQS RSYDLPAWSV SILPDCKNVA FNTAKVRSQT
501: LMMDMVPANL ESSKVDGWSI FREKYGIWGN IDLVRNGFVD HINTTKDSTD YLWYTTSFDV DGSHLAGGNH VLHIESKGHA VQAFLNNELI GSAYGNGSKS
601: NFSVEMPVNL RAGKNKLSLL SMTVGLQNGG PMYEWAGAGI TSVKISGMEN RIIDLSSNKW EYKIGLEGEY YSLFKADKGK DIRWMPQSEP PKNQPMTWYK
701: VNVDVPQGDD PVGLDMQSMG KGLAWLNGNA IGRYWPRISP VSDRCTSSCD YRGTFSPNKC RRGCGQPTQR WYHVPRSWFH PSGNTLVIFE EKGGDPTKIT
801: FSRRTVASVC SFVSEHYPSI DLESWDRNTQ NDGRDAAKVQ LSCPKGKSIS SVKFVSFGNP SGTCRSYQQG SCHHPNSISV VEKACLNMNG CTVSLSDEGF
901: GEDLCPGVTK TLAIEADCS

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.