Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 7
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G36360.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER92805 | Sorghum | vacuole | 88.94 | 88.84 |
Zm00001d048440_P003 | Maize | vacuole | 88.7 | 85.85 |
TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 85.85 | 85.55 |
TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 85.73 | 85.33 |
TraesCS4D01G279400.4 | Wheat | vacuole | 85.49 | 84.79 |
HORVU4Hr1G074280.4 | Barley | vacuole | 85.14 | 84.53 |
Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 88.58 | 81.15 |
GSMUA_Achr4P06620_001 | Banana | cytosol | 59.1 | 77.17 |
GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 76.69 | 75.62 |
GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 78.0 | 75.58 |
KRH76716 | Soybean | nucleus | 71.58 | 70.91 |
KRH15132 | Soybean | mitochondrion, nucleus | 61.71 | 70.9 |
KRH05876 | Soybean | nucleus | 61.47 | 70.63 |
VIT_18s0001g13230.t01 | Wine grape | extracellular, golgi | 71.58 | 70.49 |
KRH28740 | Soybean | nucleus | 71.22 | 70.22 |
VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 70.15 | 69.82 |
KRH08131 | Soybean | nucleus | 70.39 | 69.81 |
PGSC0003DMT400079498 | Potato | vacuole | 60.29 | 69.74 |
KRH69834 | Soybean | extracellular, golgi | 70.15 | 69.58 |
CDY36028 | Canola | plastid | 58.86 | 69.52 |
KRH61101 | Soybean | nucleus | 60.76 | 69.43 |
AT1G45130.1 | Thale cress | golgi, vacuole | 60.4 | 69.4 |
Bra014036.1-P | Field mustard | plastid | 58.74 | 69.38 |
Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 69.56 | 69.23 |
Solyc01g110000.2.1 | Tomato | nucleus | 59.81 | 69.19 |
PGSC0003DMT400009496 | Potato | nucleus, peroxisome, vacuole | 44.47 | 69.13 |
PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 69.32 | 68.99 |
Bra036334.1-P | Field mustard | golgi, vacuole | 59.81 | 68.9 |
CDY53959 | Canola | golgi, vacuole | 59.69 | 68.77 |
CDY47949 | Canola | golgi, vacuole | 59.57 | 68.63 |
Solyc04g080840.1.1 | Tomato | extracellular, golgi | 59.81 | 68.44 |
VIT_03s0038g00150.t01 | Wine grape | vacuole | 70.04 | 68.25 |
Bra011677.1-P | Field mustard | golgi, vacuole | 69.08 | 67.87 |
AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 68.85 | 67.64 |
CDX69219 | Canola | vacuole | 66.23 | 67.6 |
CDX75569 | Canola | golgi, vacuole | 66.47 | 67.59 |
CDY59693 | Canola | vacuole | 68.25 | 67.06 |
KRH51779 | Soybean | vacuole | 56.12 | 66.2 |
Os01t0580200-01 | Rice | golgi, vacuole | 64.33 | 65.42 |
Os06t0573600-01 | Rice | plasma membrane, vacuole | 52.68 | 61.96 |
Bra017756.1-P | Field mustard | cytosol, nucleus, vacuole | 21.76 | 60.2 |
CDY59691 | Canola | cytosol, nucleus, vacuole | 24.97 | 59.66 |
Os02t0219200-01 | Rice | peroxisome, vacuole | 34.84 | 58.6 |
CDY59725 | Canola | cytosol | 21.17 | 57.05 |
Os06t0628500-00 | Rice | extracellular, golgi, vacuole | 18.31 | 52.38 |
Os03t0255100-01 | Rice | extracellular | 53.15 | 46.76 |
Os05t0428100-00 | Rice | golgi, vacuole | 44.47 | 46.12 |
Os01t0875500-01 | Rice | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 50.18 | 45.92 |
Os12t0429200-01 | Rice | plasma membrane | 49.82 | 45.59 |
Os09t0539200-01 | Rice | vacuole | 23.78 | 44.84 |
Os10t0340600-01 | Rice | extracellular, golgi, vacuole | 42.33 | 43.0 |
Os10t0330600-01 | Rice | extracellular | 41.5 | 42.15 |
Os08t0549200-01 | Rice | plasma membrane | 42.45 | 42.1 |
Protein Annotations
KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:4331730 | ProteinID:ABF94149.1 | EMBL:AF499737 |
EMBL:AF508799 | EMBL:AK102192 | ProteinID:BAF10982.1 | ProteinID:BAS82468.1 | ProteinID:BAS82469.1 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
GO:GO:0048046 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF |
InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | EnsemblPlantsGene:Os03g0165400 | EnsemblPlants:Os03t0165400-01 | PFAM:PF01301 |
PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF51 |
UniProt:Q10RB4 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0000DB4C44 | RefSeq:XP_015633043.1 |
SEG:seg | : | : | : | : | : |
Description
BETA-GALACTOSIDASE 1Similar to Relative to SR12 protein (Fragment). (Os03t0165400-01);Similar to Beta-galactosidase. (Os03t0165400-02)
Coordinates
chr3:-:3525115..3531350
Molecular Weight (calculated)
92177.2 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.213
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGCLAALL GGAVAVAVLV AVVHCAVTYD KKAVLVDGQR RILFSGSIHY PRSTPEMWDG LIEKAKDGGL DVIQTYVFWN GHEPTPGNYN FEGRYDLVRF
101: IKTVQKAGMF VHLRIGPYIC GEWNFGGFPV WLKYVPGISF RTDNEPFKNA MQGFTEKIVG MMKSENLFAS QGGPIILSQI ENEYGPEGKE FGAAGKAYIN
201: WAAKMAVGLD TGVPWVMCKE DDAPDPVINA CNGFYCDTFS PNKPYKPTMW TEAWSGWFTE FGGTIRQRPV EDLAFGVARF VQKGGSFINY YMYHGGTNFG
301: RTAGGPFITT SYDYDAPLDE YGLAREPKFG HLKELHRAVK LCEQPLVSAD PTVTTLGSMQ EAHVFRSSSG CAAFLANYNS NSYAKVIFNN ENYSLPPWSI
401: SILPDCKNVV FNTATVGVQT NQMQMWADGA SSMMWEKYDE EVDSLAAAPL LTSTGLLEQL NVTRDTSDYL WYITSVEVDP SEKFLQGGTP LSLTVQSAGH
501: ALHVFINGQL QGSAYGTRED RKISYSGNAN LRAGTNKVAL LSVACGLPNV GVHYETWNTG VVGPVVIHGL DEGSRDLTWQ TWSYQVGLKG EQMNLNSLEG
601: SGSVEWMQGS LVAQNQQPLA WYRAYFDTPS GDEPLALDMG SMGKGQIWIN GQSIGRYWTA YAEGDCKGCH YTGSYRAPKC QAGCGQPTQR WYHVPRSWLQ
701: PTRNLLVVFE ELGGDSSKIA LAKRTVSGVC ADVSEYHPNI KNWQIESYGE PEFHTAKVHL KCAPGQTISA IKFASFGTPL GTCGTFQQGE CHSINSNSVL
801: EKKCIGLQRC VVAISPSNFG GDPCPEVMKR VAVEAVCSTA A
101: IKTVQKAGMF VHLRIGPYIC GEWNFGGFPV WLKYVPGISF RTDNEPFKNA MQGFTEKIVG MMKSENLFAS QGGPIILSQI ENEYGPEGKE FGAAGKAYIN
201: WAAKMAVGLD TGVPWVMCKE DDAPDPVINA CNGFYCDTFS PNKPYKPTMW TEAWSGWFTE FGGTIRQRPV EDLAFGVARF VQKGGSFINY YMYHGGTNFG
301: RTAGGPFITT SYDYDAPLDE YGLAREPKFG HLKELHRAVK LCEQPLVSAD PTVTTLGSMQ EAHVFRSSSG CAAFLANYNS NSYAKVIFNN ENYSLPPWSI
401: SILPDCKNVV FNTATVGVQT NQMQMWADGA SSMMWEKYDE EVDSLAAAPL LTSTGLLEQL NVTRDTSDYL WYITSVEVDP SEKFLQGGTP LSLTVQSAGH
501: ALHVFINGQL QGSAYGTRED RKISYSGNAN LRAGTNKVAL LSVACGLPNV GVHYETWNTG VVGPVVIHGL DEGSRDLTWQ TWSYQVGLKG EQMNLNSLEG
601: SGSVEWMQGS LVAQNQQPLA WYRAYFDTPS GDEPLALDMG SMGKGQIWIN GQSIGRYWTA YAEGDCKGCH YTGSYRAPKC QAGCGQPTQR WYHVPRSWLQ
701: PTRNLLVVFE ELGGDSSKIA LAKRTVSGVC ADVSEYHPNI KNWQIESYGE PEFHTAKVHL KCAPGQTISA IKFASFGTPL GTCGTFQQGE CHSINSNSVL
801: EKKCIGLQRC VVAISPSNFG GDPCPEVMKR VAVEAVCSTA A
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
Arabidopsis Description
BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.