Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36360.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G36360.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75569 | Canola | golgi, vacuole | 98.42 | 98.07 |
| CDY59691 | Canola | cytosol, nucleus, vacuole | 39.44 | 92.33 |
| CDY59693 | Canola | vacuole | 95.63 | 92.06 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 94.9 | 91.36 |
| CDY59725 | Canola | cytosol | 31.07 | 82.05 |
| VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 77.79 | 75.86 |
| KRH76716 | Soybean | nucleus | 78.03 | 75.74 |
| KRH28740 | Soybean | nucleus | 77.91 | 75.26 |
| KRH69834 | Soybean | extracellular, golgi | 77.18 | 75.0 |
| KRH08131 | Soybean | nucleus | 76.7 | 74.53 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 75.0 | 73.14 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 74.76 | 72.9 |
| GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 70.87 | 68.46 |
| GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 71.6 | 67.97 |
| EER92805 | Sorghum | vacuole | 68.81 | 67.34 |
| GSMUA_Achr4P06620_001 | Banana | cytosol | 51.82 | 66.3 |
| Os03t0165400-01 | Rice | vacuole | 67.6 | 66.23 |
| CDY53959 | Canola | golgi, vacuole | 58.62 | 66.16 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 67.72 | 66.04 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 67.84 | 65.92 |
| CDY47949 | Canola | golgi, vacuole | 58.37 | 65.89 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 67.35 | 65.76 |
| HORVU4Hr1G074280.4 | Barley | vacuole | 67.48 | 65.64 |
| CDY36028 | Canola | plastid | 56.55 | 65.45 |
| CDX88594 | Canola | golgi, vacuole | 25.61 | 64.92 |
| Zm00001d048440_P003 | Maize | vacuole | 68.2 | 64.67 |
| Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 69.05 | 61.98 |
| CDX97513 | Canola | golgi, vacuole | 62.74 | 61.55 |
| CDY23637 | Canola | golgi, vacuole | 62.38 | 61.26 |
| CDY51738 | Canola | golgi, vacuole | 62.26 | 61.14 |
| CDY37486 | Canola | golgi, vacuole | 61.41 | 60.31 |
| CDX76255 | Canola | extracellular | 9.34 | 60.16 |
| CDX94367 | Canola | mitochondrion | 51.82 | 59.97 |
| CDX95380 | Canola | vacuole | 51.82 | 58.73 |
| CDY11899 | Canola | golgi, vacuole | 51.34 | 58.59 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 41.38 | 57.99 |
| CDY42755 | Canola | vacuole | 50.0 | 57.87 |
| CDX92753 | Canola | golgi, vacuole | 49.88 | 57.72 |
| CDY32919 | Canola | golgi, vacuole | 50.49 | 57.62 |
| CDX89360 | Canola | mitochondrion | 48.42 | 57.08 |
| CDY20708 | Canola | golgi, vacuole | 50.0 | 57.06 |
| CDX98327 | Canola | golgi, vacuole | 17.11 | 56.18 |
| CDY70594 | Canola | cytosol | 27.31 | 54.09 |
| CDY69471 | Canola | cytosol | 27.06 | 53.61 |
| CDY15749 | Canola | golgi, vacuole | 54.61 | 53.32 |
| CDY31204 | Canola | golgi, vacuole | 54.25 | 52.96 |
| CDX83288 | Canola | golgi, vacuole | 54.13 | 52.78 |
| CDY04567 | Canola | golgi, vacuole | 54.25 | 52.59 |
| CDY43757 | Canola | golgi, vacuole | 44.05 | 48.99 |
| CDX84446 | Canola | golgi, vacuole | 43.57 | 48.45 |
| CDY70160 | Canola | vacuole | 32.04 | 48.44 |
| CDY39845 | Canola | vacuole | 40.53 | 46.39 |
| CDX84445 | Canola | vacuole | 40.17 | 45.97 |
| CDX67790 | Canola | vacuole | 45.15 | 45.64 |
| CDY19166 | Canola | golgi, vacuole | 49.15 | 45.61 |
| CDY65885 | Canola | vacuole | 45.39 | 45.55 |
| CDY23785 | Canola | vacuole | 49.03 | 45.24 |
| CDX93659 | Canola | vacuole | 44.9 | 45.23 |
| CDY34975 | Canola | golgi, plasma membrane, vacuole | 43.2 | 45.18 |
| CDY28339 | Canola | vacuole | 43.2 | 45.18 |
| CDY31349 | Canola | vacuole | 40.29 | 44.8 |
| CDY69031 | Canola | cytosol, plastid, vacuole | 32.4 | 43.0 |
| CDY43756 | Canola | cytosol, nucleus, peroxisome | 25.85 | 41.76 |
| CDY31414 | Canola | cytosol, golgi, mitochondrion, peroxisome | 38.23 | 40.38 |
| CDX75479 | Canola | vacuole | 41.02 | 40.0 |
| CDX69103 | Canola | vacuole | 40.9 | 39.93 |
| CDY40650 | Canola | vacuole | 40.53 | 39.57 |
| CDX72512 | Canola | vacuole | 40.53 | 39.57 |
| CDY32304 | Canola | cytosol | 42.23 | 39.46 |
| CDX72747 | Canola | vacuole | 40.29 | 37.47 |
| CDY70118 | Canola | cytosol | 26.7 | 37.04 |
| CDY22419 | Canola | cytosol | 40.41 | 34.83 |
| CDY53917 | Canola | plastid | 43.08 | 34.5 |
| CDY02241 | Canola | golgi, vacuole | 40.9 | 34.07 |
| CDX67763 | Canola | golgi, plasma membrane, vacuole | 30.95 | 33.07 |
| CDX89744 | Canola | vacuole | 40.9 | 31.03 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:A0A078BZ13 | EnsemblPlants:CDX69219 | ProteinID:CDX69219 |
| ProteinID:CDX69219.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00131023001 | InterPro:Galactose-bd-like_sf |
| InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 |
| InterPro:Lectin_gal-bd_dom | PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF79 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | TMHMM:TMhelix |
| UniParc:UPI0004EE0474 | SEG:seg | : | : | : | : |
Description
BnaC01g02340D
Coordinates
chrLK031789:-:3542176..3546907
Molecular Weight (calculated)
91867.2 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.322
Length
824 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTGDTAPRL ILWLCLGFLI LGVGFVQCGV TYDRKALLIN GQRRILFSGS IHYPRSTPDM WEGLIQKAKD GGVDVIETYV FWNLHEPSPG KYDLEGRNDL
101: VRFVKTIHKA GLYAHLRIGP YVCAEWNFGG FPVWLKYVPR ISFRTDNEPF KRAMQGFTER IVELMKSENL YESQGGPIIL SQIENEYGRQ GQLLGAEGHN
201: YMTWAAKMAI ATETGVPWVM CKEDDAPDPV INTCNGFYCH SFAPNKPYKP LIWTEAWSGW FTEFGGPMHH RPVQDLAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF VTTSYDYDAP IDEYGLIREP KYGHLKELHR AIKMCEKALV STDPVVTSLG NKQQAHVYSS ESGDCSAFLA NYDTESAARV LFNNVHYNLP
401: PWSISILPDC RNAVFNTAKV GVQTSQMEML PTSTPNFQWQ SYLEDLSSLD DSSTFTTQGL LEQINVTRDT SDYLWYMTSV DIGSTESFLH GGELPTLIIQ
501: STGHAVHIFV NGQLSGSAFG TRQNRRFTYR GKINLHSGTN RIALLSVAVG LPNVGGHFES WNTGILGPVA LHGLSQGKRD LSWQKWTYQV GLKGEAMNLA
601: YPTNTPSNGW MDVSLIVQKP QPLTWHKAYF DAPEGNEPLA LDMEGMGKGQ IWVNGESIGR YWTAFATGDC GHCSYTGTYK PNKCLSGCGQ PTQRYYHVPR
701: SWLKPSQNLL YHPNIKNWQI ESYGKGQTFR RPKVHLKCSP GQAISAIKFA SFGTPLGKCG SYQQGECHAA TSYAILERKC VGKARCAVTI SNSNFGKDPC
801: PNVLKRLTVE AVCSPETSIT SWKP
101: VRFVKTIHKA GLYAHLRIGP YVCAEWNFGG FPVWLKYVPR ISFRTDNEPF KRAMQGFTER IVELMKSENL YESQGGPIIL SQIENEYGRQ GQLLGAEGHN
201: YMTWAAKMAI ATETGVPWVM CKEDDAPDPV INTCNGFYCH SFAPNKPYKP LIWTEAWSGW FTEFGGPMHH RPVQDLAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF VTTSYDYDAP IDEYGLIREP KYGHLKELHR AIKMCEKALV STDPVVTSLG NKQQAHVYSS ESGDCSAFLA NYDTESAARV LFNNVHYNLP
401: PWSISILPDC RNAVFNTAKV GVQTSQMEML PTSTPNFQWQ SYLEDLSSLD DSSTFTTQGL LEQINVTRDT SDYLWYMTSV DIGSTESFLH GGELPTLIIQ
501: STGHAVHIFV NGQLSGSAFG TRQNRRFTYR GKINLHSGTN RIALLSVAVG LPNVGGHFES WNTGILGPVA LHGLSQGKRD LSWQKWTYQV GLKGEAMNLA
601: YPTNTPSNGW MDVSLIVQKP QPLTWHKAYF DAPEGNEPLA LDMEGMGKGQ IWVNGESIGR YWTAFATGDC GHCSYTGTYK PNKCLSGCGQ PTQRYYHVPR
701: SWLKPSQNLL YHPNIKNWQI ESYGKGQTFR RPKVHLKCSP GQAISAIKFA SFGTPLGKCG SYQQGECHAA TSYAILERKC VGKARCAVTI SNSNFGKDPC
801: PNVLKRLTVE AVCSPETSIT SWKP
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
Arabidopsis Description
BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.