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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69471 Canola cytosol 97.6 97.6
CDY11899 Canola golgi, vacuole 98.56 56.79
Bra006850.1-P Field mustard golgi, vacuole 97.84 56.37
CDX76254 Canola golgi, nucleus, vacuole 76.68 54.25
AT5G56870.1 Thale cress vacuole 89.66 51.52
CDY32919 Canola golgi, vacuole 87.5 50.42
CDY20708 Canola golgi, vacuole 86.54 49.86
CDX89360 Canola mitochondrion 78.85 46.92
Os02t0219200-01 Rice peroxisome, vacuole 55.53 46.2
CDX94367 Canola mitochondrion 78.37 45.79
PGSC0003DMT400011458 Potato cytosol, nucleus, peroxisome 48.56 45.19
CDY42755 Canola vacuole 75.96 44.38
CDX95380 Canola vacuole 76.68 43.88
CDX92753 Canola golgi, vacuole 75.0 43.82
CDY59725 Canola cytosol 30.77 41.03
PGSC0003DMT400000899 Potato nucleus, peroxisome, vacuole 64.66 40.15
KRH37385 Soybean nucleus 64.42 37.17
Solyc12g008840.1.1 Tomato extracellular 64.18 36.88
KRH12385 Soybean vacuole 63.22 36.48
CDY59691 Canola cytosol, nucleus, vacuole 29.81 35.23
GSMUA_Achr7P08970_001 Banana vacuole 61.54 35.07
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 62.02 35.05
GSMUA_Achr6P00880_001 Banana golgi, vacuole 61.06 34.6
GSMUA_Achr7P08940_001 Banana vacuole 59.86 34.02
GSMUA_Achr7P08950_001 Banana golgi, vacuole 59.86 33.83
Os06t0573600-01 Rice plasma membrane, vacuole 57.69 33.57
TraesCS6A01G185400.1 Wheat golgi, vacuole 57.21 32.87
EER88554 Sorghum golgi, vacuole 57.21 32.83
Zm00001d046357_P001 Maize extracellular 56.73 32.69
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 56.01 32.45
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 56.01 32.45
TraesCS6B01G214100.1 Wheat golgi, vacuole 56.49 32.41
TraesCS7D01G359500.1 Wheat golgi 55.77 32.36
TraesCS6D01G172400.1 Wheat golgi, vacuole 56.25 32.28
VIT_11s0016g02200.t01 Wine grape vacuole 63.94 31.82
EES06516 Sorghum mitochondrion, plastid 55.77 31.35
CDY36028 Canola plastid 53.61 31.32
CDY23637 Canola golgi, vacuole 62.98 31.23
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 62.98 31.23
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 56.01 31.19
CDX97513 Canola golgi, vacuole 62.98 31.19
CDY53959 Canola golgi, vacuole 54.57 31.1
CDY47949 Canola golgi, vacuole 54.33 30.96
HORVU6Hr1G039490.6 Barley plastid 56.73 30.89
CDY51738 Canola golgi, vacuole 62.26 30.87
GSMUA_Achr2P16780_001 Banana plastid 62.26 30.8
CDY43756 Canola cytosol, nucleus, peroxisome 37.74 30.78
KRH02714 Soybean golgi, vacuole 62.02 30.75
CDY37486 Canola golgi, vacuole 61.78 30.63
Zm00001d044290_P005 Maize golgi, vacuole 59.86 30.0
OQU87043 Sorghum golgi, vacuole 58.89 29.63
Os01t0580200-01 Rice golgi, vacuole 58.65 29.5
HORVU3Hr1G050450.12 Barley golgi, vacuole 58.65 29.36
TraesCS3A01G208600.1 Wheat plastid 58.17 28.98
TraesCS3D01G211500.2 Wheat golgi, vacuole 57.93 28.86
GSMUA_Achr6P35850_001 Banana golgi, vacuole 56.97 28.76
TraesCS3B01G235100.1 Wheat golgi, vacuole 57.69 28.67
Zm00001d053585_P002 Maize plastid 56.25 28.23
CDX75569 Canola golgi, vacuole 54.33 27.33
CDX69219 Canola vacuole 54.09 27.31
CDY59693 Canola vacuole 55.77 27.1
CDX84446 Canola golgi, vacuole 47.6 26.72
CDY43757 Canola golgi, vacuole 47.36 26.59
CDY69031 Canola cytosol, plastid, vacuole 39.18 26.25
CDY70118 Canola cytosol 34.38 24.07
CDY31204 Canola golgi, vacuole 46.63 22.99
CDX83288 Canola golgi, vacuole 46.63 22.96
CDY15749 Canola golgi, vacuole 46.39 22.87
CDY04567 Canola golgi, vacuole 45.43 22.24
CDY39845 Canola vacuole 37.74 21.81
CDX84445 Canola vacuole 37.26 21.53
CDY31349 Canola vacuole 37.98 21.32
CDY23785 Canola vacuole 43.75 20.38
CDX67790 Canola vacuole 39.9 20.37
CDY65885 Canola vacuole 40.14 20.34
CDY19166 Canola golgi, vacuole 43.27 20.27
CDX93659 Canola vacuole 39.42 20.05
CDY34975 Canola golgi, plasma membrane, vacuole 35.82 18.91
CDY28339 Canola vacuole 35.82 18.91
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 34.38 18.33
CDY32304 Canola cytosol 38.22 18.03
CDX75479 Canola vacuole 34.86 17.16
CDX69103 Canola vacuole 34.62 17.06
CDX72512 Canola vacuole 34.13 16.82
CDY40650 Canola vacuole 34.13 16.82
CDY70160 Canola vacuole 20.91 15.96
CDX72747 Canola vacuole 33.41 15.69
CDY02241 Canola golgi, vacuole 34.62 14.56
CDY22419 Canola cytosol 33.17 14.44
CDY53917 Canola plastid 35.1 14.19
CDX89744 Canola vacuole 34.62 13.26
CDX67763 Canola golgi, plasma membrane, vacuole 18.03 9.73
CDX88594 Canola golgi, vacuole 4.33 5.54
CDX76255 Canola extracellular 0.0 0.0
CDX98327 Canola golgi, vacuole 0.0 0.0
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:35.1GO:A0A078JUU3UniProt:A0A078JUU3EnsemblPlants:CDY70594ProteinID:CDY70594ProteinID:CDY70594.1
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00004621001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glycoside_Hdrlase_35InterPro:IPR008979
PFAM:PF01301PRINTS:PR00742PANTHER:PTHR23421PANTHER:PTHR23421:SF63MetaCyc:PWY-6807SUPFAM:SSF49785
UniParc:UPI0004EEC4EC:::::
Description
BnaCnng68980DBnaCnng68980D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUU3]
Coordinates
chrLK042622:-:969..3183
Molecular Weight (calculated)
46316.7 Da
IEP (calculated)
9.391
GRAVY (calculated)
-0.379
Length
416 amino acids
Sequence
(BLAST)
001: EFMASSYDYD APLDEYGLTR EPKYSHLKAL HKVIKLSETA LVSADATVTS LGAKQEAHVF WSKSSCAAFL SNNDANSAAR VMFRGFPYDL PPWSVSILPD
101: CKTEYYNTAK VNAPRVHRNM VPTGTRFSWE SFNEATPSAN ERDTFARNGL VEQISMTWDK SDYFWYLTDI TIGAGERFLQ TGDYPLLTIW SAGHALHVFV
201: NGQLAGSAYG GLSHPKLTFS QKIKLHAGVN KLALLSVAVG LPNVGQHFET WNKGVLGPVT LKGVNSGTWD MSKWKWSYKI GVKGEAMSLH TDSSSVSWNQ
301: GSYVVKKQPL TWYKSTFSAP GGNEPLALDM NTMGKGHVWI NGRNIGRHWP AYKAQGNCRR CNYAGTFDAK KCLSNCGEAS QRWYHVPRSW LKSQNLIVVF
401: EEWGGDPNGI SLVKRT
Best Arabidopsis Sequence Match ( AT3G52840.1 )
(BLAST)
001: MSMHFRNKAW IILAILCFSS LIHSTEAVVT YDHKALIING QRRILISGSI HYPRSTPEMW PDLIKKAKEG GLDVIQTYVF WNGHEPSPGN YYFQDRYDLV
101: KFTKLVHQAG LYLDLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK IAMQKFTKKI VDMMKEEKLF ETQGGPIILS QIENEYGPMQ WEMGAAGKAY
201: SKWTAEMALG LSTGVPWIMC KQEDAPYPII DTCNGFYCEG FKPNSDNKPK LWTENWTGWF TEFGGAIPNR PVEDIAFSVA RFIQNGGSFM NYYMYYGGTN
301: FDRTAGVFIA TSYDYDAPID EYGLLREPKY SHLKELHKVI KLCEPALVSV DPTITSLGDK QEIHVFKSKT SCAAFLSNYD TSSAARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKIRAP TILMKMIPTS TKFSWESYNE GSPSSNEAGT FVKDGLVEQI SMTRDKTDYF WYFTDITIGS DESFLKTGDN PLLTIFSAGH
501: ALHVFVNGLL AGTSYGALSN SKLTFSQNIK LSVGINKLAL LSTAVGLPNA GVHYETWNTG ILGPVTLKGV NSGTWDMSKW KWSYKIGLRG EAMSLHTLAG
601: SSAVKWWIKG FVVKKQPLTW YKSSFDTPRG NEPLALDMNT MGKGQVWVNG HNIGRHWPAY TARGNCGRCN YAGIYNEKKC LSHCGEPSQR WYHVPRSWLK
701: PFGNLLVIFE EWGGDPSGIS LVKRTAK
Arabidopsis Description
BGAL2Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM56]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.