CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, golgi, nucleus

Predictor Summary:

nucleus 2
vacuole 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, vacuole
Any Predictor:	golgi, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	99.49	82.16
CDX95380	Canola	vacuole	98.13	79.37
CDY69471	Canola	cytosol	54.59	77.16
CDY70594	Canola	cytosol	54.25	76.68
CDX94367	Canola	mitochondrion	80.1	66.15
CDX92753	Canola	golgi, vacuole	78.91	65.17
CDY42755	Canola	vacuole	78.57	64.89
AT3G52840.2	Thale cress	golgi, vacuole	85.03	64.02
CDY11899	Canola	golgi, vacuole	77.89	63.43
CDX89360	Canola	mitochondrion	73.81	62.09
Os02t0219200-01	Rice	peroxisome, vacuole	52.04	61.2
CDY32919	Canola	golgi, vacuole	74.49	60.66
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	68.2	59.85
CDY20708	Canola	golgi, vacuole	73.3	59.7
KRH37385	Soybean	nucleus	68.54	55.89
KRH12385	Soybean	vacuole	68.37	55.76
Solyc12g008840.1.1	Tomato	extracellular	67.86	55.11
GSMUA_Achr7P08970_001	Banana	vacuole	65.31	52.6
Zm00001d046357_P001	Maize	extracellular	64.29	52.35
EER88554	Sorghum	golgi, vacuole	64.29	52.14
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	64.63	51.77
Os06t0573600-01	Rice	plasma membrane, vacuole	62.24	51.19
TraesCS7D01G359500.1	Wheat	golgi	62.41	51.19
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	62.24	50.97
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	62.07	50.84
GSMUA_Achr7P08940_001	Banana	vacuole	63.1	50.68
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	63.44	50.68
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	63.1	50.41
TraesCS6A01G185400.1	Wheat	golgi, vacuole	61.9	50.28
TraesCS6D01G172400.1	Wheat	golgi, vacuole	61.56	49.93
TraesCS6B01G214100.1	Wheat	golgi, vacuole	61.39	49.79
EES06516	Sorghum	mitochondrion, plastid	62.24	49.46
CDY36028	Canola	plastid	59.69	49.3
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	62.41	49.13
VIT_11s0016g02200.t01	Wine grape	vacuole	68.71	48.33
CDY53959	Canola	golgi, vacuole	59.69	48.08
CDY47949	Canola	golgi, vacuole	59.52	47.95
HORVU6Hr1G039490.6	Barley	plastid	62.24	47.91
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	67.86	47.56
KRH02714	Soybean	golgi, vacuole	67.69	47.44
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	35.88	47.2
CDY23637	Canola	golgi, vacuole	67.01	46.96
CDX97513	Canola	golgi, vacuole	66.84	46.79
CDY51738	Canola	golgi, vacuole	66.67	46.72
CDX88594	Canola	golgi, vacuole	25.68	46.46
CDY37486	Canola	golgi, vacuole	65.82	46.13
Zm00001d044290_P005	Maize	golgi, vacuole	64.46	45.66
OQU87043	Sorghum	golgi, vacuole	64.12	45.59
TraesCS3A01G208600.1	Wheat	plastid	64.29	45.27
HORVU3Hr1G050450.12	Barley	golgi, vacuole	63.95	45.25
TraesCS3D01G211500.2	Wheat	golgi, vacuole	64.12	45.15
GSMUA_Achr2P16780_001	Banana	plastid	64.46	45.07
Os01t0580200-01	Rice	golgi, vacuole	63.1	44.86
TraesCS3B01G235100.1	Wheat	golgi, vacuole	63.61	44.68
Zm00001d053585_P002	Maize	plastid	62.93	44.63
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	61.56	43.93
CDY43756	Canola	cytosol, nucleus, peroxisome	37.93	43.73
CDX75569	Canola	golgi, vacuole	58.5	41.6
CDX69219	Canola	vacuole	57.99	41.38
CDY59725	Canola	cytosol	21.77	41.03
CDY59693	Canola	vacuole	58.67	40.3
CDX84446	Canola	golgi, vacuole	50.34	39.95
CDY43757	Canola	golgi, vacuole	50.17	39.81
CDY69031	Canola	cytosol, plastid, vacuole	40.99	38.81
CDY15749	Canola	golgi, vacuole	54.93	38.27
CDY04567	Canola	golgi, vacuole	53.91	37.29
CDY31204	Canola	golgi, vacuole	53.4	37.2
CDX83288	Canola	golgi, vacuole	53.4	37.16
CDY39845	Canola	vacuole	45.07	36.81
CDY70160	Canola	vacuole	33.67	36.33
CDX84445	Canola	vacuole	44.05	35.97
CDY31349	Canola	vacuole	44.9	35.63
CDX67790	Canola	vacuole	47.28	34.11
CDY59691	Canola	cytosol, nucleus, vacuole	20.41	34.09
CDX93659	Canola	vacuole	47.11	33.86
CDY65885	Canola	vacuole	47.28	33.86
CDY19166	Canola	golgi, vacuole	50.68	33.56
CDY28339	Canola	vacuole	44.9	33.5
CDY34975	Canola	golgi, plasma membrane, vacuole	44.9	33.5
CDY23785	Canola	vacuole	50.85	33.48
CDY70118	Canola	cytosol	31.8	31.48
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	40.99	30.9
CDY32304	Canola	cytosol	45.07	30.05
CDX98327	Canola	golgi, vacuole	12.59	29.48
CDX75479	Canola	vacuole	41.33	28.76
CDX69103	Canola	vacuole	41.16	28.67
CDX72512	Canola	vacuole	40.48	28.2
CDY40650	Canola	vacuole	40.48	28.2
CDX72747	Canola	vacuole	40.82	27.09
CDY53917	Canola	plastid	44.22	25.27
CDY22419	Canola	cytosol	40.99	25.21
CDX67763	Canola	golgi, plasma membrane, vacuole	31.8	24.25
CDY02241	Canola	golgi, vacuole	40.65	24.17
CDX89744	Canola	vacuole	40.82	22.1
CDX76255	Canola	extracellular	0.0	0.0

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078CJN2	EnsemblPlants:CDX76254	ProteinID:CDX76254	ProteinID:CDX76254.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00126596001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421
PANTHER:PTHR23421:SF63	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0004EEF2F1	:

Description

BnaA04g05180D

Coordinates

chrLK031806:-:2226394..2231698

Molecular Weight (calculated)

65561.7 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.364

Length

588 amino acids

Sequence
(BLAST)

001: MIFRTDNGPF KTAMQKFTKK IVDIMKEEKL FETQGGPIIL SQIENEYGPM EWEIGSAGKA YTKWTAAMAL GLSTGVPWVM CKQDDAPYPI INTCNGFYCE
101: GFKPNSVDQP KMWTENWTGW FTEFGGAIPN RPVEDLAFSV ARFIQNGGSF MNYYMYHGGT NFDRTSGEFI TTSYDYDAPL DEYGLLREPK YSHLKELHKI
201: IKLCEPALVS VDPTINSLGN KQEAHVFKSK TSCAAFLSNY DTSYPAKVMF RGFPYDLPPW SISILPDCKT EYHNTAKIRS PSILMKMVPT STRLSWESYN
301: EAIPSSGDYG TFARDGLLEQ ISMTRDKTDY FWYLTDITIS SNEGFLKTGE DPLLTICSAG HALHVFVNGQ LAGTSYGALS SPKLTFSQRI KLREGVNKLA
401: ILSTAVGLPN AGVHYETWNT GVLGPATLNG VNSGAWDMSK WKWSYKIGTK GEAMSLHTTT GSSSVEWTEG SFVAVKQPLT WYKSSFNAPV GNEPIALDMN
501: TMGKGQVWVN GRNIGRHWPA YTAHGNCGRC NYAGIYSEKK CLSNCGQSSQ RWYHVPRSWL KPSGNLLVVF EEWGGDPSGI SVVKRTDK

Best Arabidopsis Sequence Match ( AT3G52840.1 )
(BLAST)

001: MSMHFRNKAW IILAILCFSS LIHSTEAVVT YDHKALIING QRRILISGSI HYPRSTPEMW PDLIKKAKEG GLDVIQTYVF WNGHEPSPGN YYFQDRYDLV
101: KFTKLVHQAG LYLDLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK IAMQKFTKKI VDMMKEEKLF ETQGGPIILS QIENEYGPMQ WEMGAAGKAY
201: SKWTAEMALG LSTGVPWIMC KQEDAPYPII DTCNGFYCEG FKPNSDNKPK LWTENWTGWF TEFGGAIPNR PVEDIAFSVA RFIQNGGSFM NYYMYYGGTN
301: FDRTAGVFIA TSYDYDAPID EYGLLREPKY SHLKELHKVI KLCEPALVSV DPTITSLGDK QEIHVFKSKT SCAAFLSNYD TSSAARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKIRAP TILMKMIPTS TKFSWESYNE GSPSSNEAGT FVKDGLVEQI SMTRDKTDYF WYFTDITIGS DESFLKTGDN PLLTIFSAGH
501: ALHVFVNGLL AGTSYGALSN SKLTFSQNIK LSVGINKLAL LSTAVGLPNA GVHYETWNTG ILGPVTLKGV NSGTWDMSKW KWSYKIGLRG EAMSLHTLAG
601: SSAVKWWIKG FVVKKQPLTW YKSSFDTPRG NEPLALDMNT MGKGQVWVNG HNIGRHWPAY TARGNCGRCN YAGIYNEKKC LSHCGEPSQR WYHVPRSWLK
701: PFGNLLVIFE EWGGDPSGIS LVKRTAK

Arabidopsis Description

BGAL2Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM56]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.