CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	96.42	96.42
KRH12385	Soybean	vacuole	71.28	82.94
KRH37385	Soybean	nucleus	70.44	81.97
CDX88594	Canola	golgi, vacuole	30.51	78.77
VIT_11s0016g02200.t01	Wine grape	vacuole	76.4	76.67
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	60.31	75.52
Solyc12g008840.1.1	Tomato	extracellular	63.89	74.03
CDX94367	Canola	mitochondrion	61.38	72.33
KRH10007	Soybean	nucleus	71.75	71.67
CDX76255	Canola	extracellular	10.85	71.09
KRH23324	Soybean	vacuole	70.92	70.75
KRH47126	Soybean	nucleus	70.8	70.3
KRH44153	Soybean	nucleus	70.56	70.23
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	61.26	70.22
AT5G56870.1	Thale cress	vacuole	60.55	70.17
GSMUA_Achr7P08970_001	Banana	vacuole	60.79	69.86
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	59.24	69.8
CDY11899	Canola	golgi, vacuole	59.95	69.67
CDX92753	Canola	golgi, vacuole	59.12	69.66
Bra006850.1-P	Field mustard	golgi, vacuole	59.71	69.39
Bra019120.1-P	Field mustard	golgi, vacuole	58.76	69.24
CDY42755	Canola	vacuole	58.52	68.96
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	36.47	68.46
GSMUA_Achr7P08940_001	Banana	vacuole	59.71	68.44
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	59.95	68.34
CDX89360	Canola	mitochondrion	56.85	68.24
CDX95380	Canola	vacuole	59.12	68.23
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	66.87	68.08
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	59.71	68.07
AT4G26140.7	Thale cress	vacuole	60.91	67.86
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	59.36	67.85
CDX76254	Canola	golgi, nucleus, vacuole	47.44	67.69
CDY32919	Canola	golgi, vacuole	58.16	67.59
Os01t0580200-01	Rice	golgi, vacuole	66.39	67.35
OQU87043	Sorghum	golgi, vacuole	66.15	67.11
Bra035634.1-P	Field mustard	golgi, vacuole	57.69	67.04
CDY20708	Canola	golgi, vacuole	57.57	66.9
Zm00001d044290_P005	Maize	golgi, vacuole	65.44	66.14
Zm00001d046357_P001	Maize	extracellular	56.73	65.93
Os06t0573600-01	Rice	plasma membrane, vacuole	56.14	65.87
EER88554	Sorghum	golgi, vacuole	56.62	65.52
TraesCS7D01G359500.1	Wheat	golgi	55.9	65.41
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	55.78	65.18
TraesCS3D01G211500.2	Wheat	golgi, vacuole	64.84	65.15
TraesCS3A01G208600.1	Wheat	plastid	64.6	64.91
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	55.54	64.9
HORVU3Hr1G050450.12	Barley	golgi, vacuole	64.24	64.86
TraesCS3B01G235100.1	Wheat	golgi, vacuole	64.6	64.76
TraesCS6A01G185400.1	Wheat	golgi, vacuole	55.78	64.64
TraesCS6B01G214100.1	Wheat	golgi, vacuole	55.66	64.41
TraesCS6D01G172400.1	Wheat	golgi, vacuole	55.54	64.28
AT3G52840.2	Thale cress	golgi, vacuole	59.71	64.15
EES06516	Sorghum	mitochondrion, plastid	56.02	63.51
KRH15132	Soybean	mitochondrion, nucleus	55.3	63.39
KRH05876	Soybean	nucleus	55.18	63.25
Os02t0219200-01	Rice	peroxisome, vacuole	37.54	63.0
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	56.02	62.92
CDY70594	Canola	cytosol	30.75	62.02
CDY69471	Canola	cytosol	30.75	62.02
HORVU6Hr1G039490.6	Barley	plastid	56.02	61.52
GSMUA_Achr2P16780_001	Banana	plastid	61.02	60.88
KRH61101	Soybean	nucleus	53.16	60.6
KRH76716	Soybean	nucleus	60.07	59.36
KRH28740	Soybean	nucleus	60.07	59.09
KRH69834	Soybean	extracellular, golgi	59.12	58.49
KRH08131	Soybean	nucleus	58.88	58.25
KRH51779	Soybean	vacuole	49.46	58.2
Zm00001d053585_P002	Maize	plastid	55.78	56.45
KRH22910	Soybean	nucleus	56.26	56.19
KRH26431	Soybean	golgi, vacuole	55.42	55.36
KRH29942	Soybean	extracellular, golgi, vacuole	53.16	53.22
KRG89008	Soybean	nucleus	51.97	52.15
KRH63980	Soybean	vacuole	49.94	49.7
KRH53957	Soybean	nucleus	49.94	49.59
KRH53267	Soybean	golgi, vacuole	40.76	49.07
KRH64633	Soybean	vacuole	40.64	48.99
KRH53958	Soybean	golgi, vacuole	41.6	48.67
KRH40964	Soybean	golgi, vacuole	40.29	48.01
KRH63978	Soybean	golgi, vacuole	40.64	47.56
KRH70131	Soybean	vacuole	46.72	46.95
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	46.01	46.39
KRH19351	Soybean	extracellular, golgi, vacuole	45.17	45.83
KRH42784	Soybean	nucleus	49.58	45.76
KRH07365	Soybean	extracellular, golgi, vacuole	44.7	45.4
KRH02579	Soybean	extracellular, golgi, vacuole	45.65	45.38
KRH48710	Soybean	vacuole	45.05	44.68
KRH48708	Soybean	vacuole	45.05	44.68
KRH24309	Soybean	golgi, vacuole	43.38	43.18
KRH60700	Soybean	extracellular, golgi, vacuole	43.27	43.01
KRH29286	Soybean	extracellular, golgi, vacuole	42.55	42.4
KRH38266	Soybean	cytosol, peroxisome	29.32	42.05
KRH06832	Soybean	mitochondrion	37.07	41.47

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100810170
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EMBL:ACUP02010314	EnsemblPlantsGene:GLYMA_17G055100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	UniProt:I1MSH3
InterPro:IPR000922	InterPro:IPR008979	EnsemblPlants:KRH02714	ProteinID:KRH02714	ProteinID:KRH02714.1	InterPro:Lectin_gal-bd_dom
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF74	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000233E0D9

Description

hypothetical protein

Coordinates

chr17:-:4184594..4189690

Molecular Weight (calculated)

93154.8 Da

IEP (calculated)

7.682

GRAVY (calculated)

-0.296

Length

839 amino acids

Sequence
(BLAST)

001: MGSRVLIENL PRGNFCTLLL VLWVCAVTAS VTYDHKAIVV NGQRRILISG SIHYPRSTPE MWPDLIQKAK DGGLDVIQTY VFWNGHEPSP GKYYFEDRYD
101: LVKFIKLVQQ AGLYVHLRIG PYICAEWNFG GFPVWLKYVP GIAFRTDNEP FKAAMQKFTE KIVSIMKEEK LFQTQGGPII MSQIENEYGP VEWEIGAPGK
201: AYTKWFSQMA VGLDTGVPWI MCKQQDTPDP LIDTCNGYYC ENFTPNKKYK PKMWTENWTG WYTEFGGAVP RRPAEDMAFS VARFVQNGGS FVNYYMYHGG
301: TNFDRTSSGL FIATSYDYDG PIDEYGLLNE PKWGHLRDLH KAIKLCEPAL VSVDPTVTWP GNNLEVHVFK TSGACAAFLA NYDTKSSASV KFGNGQYDLP
401: PWSISILPDC KTAVFNTARL GAQSSLMKMT AVNSAFDWQS YNEEPASSNE DDSLTAYALW EQINVTRDST DYLWYMTDVN IDANEGFIKN GQSPVLTVMS
501: AGHVLHVLIN DQLSGTVYGG LDSHKLTFSD SVKLRVGNNK ISLLSIAVGL PNVGPHFETW NAGVLGPVTL KGLNEGTRDL SKQKWSYKIG LKGEALNLNT
601: VSGSSSVEWV QGSLLAKQQP LAWYKTTFST PAGNDPLALD MISMGKGQAW INGRSIGRHW PGYIARGNCG DCYYAGTYTD KKCRTNCGEP SQRWYHIPRS
701: WLNPSGNYLV VFEEWGGDPT GITLVKRTTA SVCADIYQGQ PTLKNRQMLD SGKVVRPKAH LWCPPGKNIS QIKFASYGLP QGTCGNFREG SCHAHKSYDA
801: PQKNCIGKQS CLVTVAPEVF GGDPCPGIAK KLSLEALCG

Best Arabidopsis Sequence Match ( AT4G26140.1 )
(BLAST)

001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA
601: GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL
701: KPTNNLVIVL EEWGGEPNGI SLVKRTAK

Arabidopsis Description

BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.