CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63978	Soybean	golgi, vacuole	94.42	94.42
KRH40964	Soybean	golgi, vacuole	78.1	79.55
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	47.0	73.1
CDY39845	Canola	vacuole	62.62	62.36
Bra029200.1-P	Field mustard	vacuole	62.34	62.08
AT5G63800.1	Thale cress	vacuole	62.06	61.98
KRH64633	Soybean	vacuole	59.97	61.78
Bra024237.1-P	Field mustard	vacuole	42.96	61.48
KRH53267	Soybean	golgi, vacuole	59.55	61.26
CDX84445	Canola	vacuole	61.51	61.25
CDY31349	Canola	vacuole	62.06	60.05
CDY43756	Canola	cytosol, nucleus, peroxisome	41.0	57.65
Os05t0428100-00	Rice	golgi, vacuole	56.76	50.19
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	57.04	49.88
KXG22057	Sorghum	vacuole	57.46	49.28
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.62	49.27
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	51.74	49.2
TraesCS1B01G278400.1	Wheat	plastid	56.49	49.15
HORVU1Hr1G065290.7	Barley	vacuole	56.07	48.91
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	55.79	48.78
KRH37385	Soybean	nucleus	48.81	48.54
GSMUA_Achr11P...	Banana	golgi, vacuole	55.23	48.47
KRH12385	Soybean	vacuole	48.67	48.41
TraesCS3A01G386100.3	Wheat	vacuole	54.95	47.41
TraesCS3B01G418200.1	Wheat	vacuole	54.81	47.18
KRH61101	Soybean	nucleus	47.7	46.47
TraesCS3D01G379100.3	Wheat	vacuole	54.81	46.29
KRH15132	Soybean	mitochondrion, nucleus	47.14	46.17
KRH05876	Soybean	nucleus	46.86	45.9
Zm00001d042656_P001	Maize	golgi, vacuole	43.38	44.3
KRH51779	Soybean	vacuole	42.68	42.92
KRH22910	Soybean	nucleus	49.79	42.5
KRH44153	Soybean	nucleus	49.51	42.11
KRH47126	Soybean	nucleus	49.37	41.89
KRH10007	Soybean	nucleus	48.95	41.79
KRH26431	Soybean	golgi, vacuole	48.81	41.67
KRH23324	Soybean	vacuole	48.81	41.62
KRH02714	Soybean	golgi, vacuole	48.67	41.6
KRH76716	Soybean	nucleus	49.23	41.58
KRH08131	Soybean	nucleus	49.09	41.51
KRH60700	Soybean	extracellular, golgi, vacuole	48.81	41.47
KRH69834	Soybean	extracellular, golgi	48.95	41.39
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	48.4	41.36
KRH28740	Soybean	nucleus	48.81	41.03
KRH29942	Soybean	extracellular, golgi, vacuole	47.56	40.69
KRG89008	Soybean	nucleus	47.0	40.31
KRH29286	Soybean	extracellular, golgi, vacuole	46.72	39.79
KRH24309	Soybean	golgi, vacuole	46.72	39.74
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	46.03	39.66
KRH70131	Soybean	vacuole	46.16	39.64
KRH63980	Soybean	vacuole	46.44	39.5
KRH53957	Soybean	nucleus	46.16	39.17
KRH07365	Soybean	extracellular, golgi, vacuole	44.49	38.62
KRH19351	Soybean	extracellular, golgi, vacuole	44.49	38.57
KRH48708	Soybean	vacuole	45.19	38.3
KRH48710	Soybean	vacuole	45.05	38.18
KRH02579	Soybean	extracellular, golgi, vacuole	44.35	37.68
KRH06832	Soybean	mitochondrion	37.52	35.87
KRH42784	Soybean	nucleus	45.33	35.75
KRH38266	Soybean	cytosol, peroxisome	27.06	33.16

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100818637
Gene3D:2.60.120.260	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EMBL:ACUP02003491	InterPro:BetaGal_jelly_roll_dom	EnsemblPlantsGene:GLYMA_06G157300
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	UniProt:I1KBP5	InterPro:IPR008979	EnsemblPlants:KRH53958
ProteinID:KRH53958	ProteinID:KRH53958.1	PFAM:PF01301	PFAM:PF13364	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF73	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0002338334	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:12918816..12927141

Molecular Weight (calculated)

80763.3 Da

IEP (calculated)

4.825

GRAVY (calculated)

-0.292

Length

717 amino acids

Sequence
(BLAST)

001: MEKWVALVLL LVLWKIREGF GVEAEEVTYD GRSLIIDGQR KILFSGSIHY PRSTPQMWPD LIAKAKQGGL DVIQTYVFWN LHEPQPGMYD FSGRYDLVGF
101: IKEIQAQGLY VCLRIGPFIE SEWTYGGFPF WLHDVPGIVY RTDNEPFKFY MQNFTTKIVN MMKEEGLYAS QGGPIILSQI ENEYQNIQKA FGTAGSQYVQ
201: WAAKMAVGLD TGVPWIMCKQ TDAPDPVINT CNGMRCGETF TGPNSPNKPA LWTENWTSFY QVYGGLPYIR SAEDIAFHVT LFIARNGSYV NYYMYHGGTN
301: FGRTGSAYVI TGYYDQAPLD EYGLLRQPKW GHLKQLHEVI KSCSTTLLQG VQRNFTLGQL LEVYVFEEEK GECVAFLINN DRDNKATVQF RNSSYELLPK
401: SISILPDCQN VTFSTANVNT TSNRRIISPK QNFSSVDDWQ QFQDVISNFD NTSLKSDSLL EQMNTTKDKS DYLWYTLRFE YNLSCSKPTL SVQSAAHVAH
501: AFVNNTYIGG EHGNHDVKSF TLELPVTVNQ GTNNLSILSV MVGLPDSGAF LERRFAGLIS VELQCSEQES LNLTNSTWGY QVGLMGEQLQ VYKEQNNSDT
601: GWSQLGNVME QTLFWYKTTF DTPEGDDPVV LDLSSMGKGE AWVNGESIGR YWILFHDSKG NPSQSLYHVP RSFLKDSGNV LVLLEEGGGN PLGISLDTVS
701: VTDLQQNFSK LSLPSSA

Best Arabidopsis Sequence Match ( AT5G63800.1 )
(BLAST)

001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS

Arabidopsis Description

BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.