Factsheet for Zm00001d042656_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	70.09	65.25
TraesCS3A01G386100.3	Wheat	vacuole	76.35	64.5
TraesCS3B01G418200.1	Wheat	vacuole	76.35	64.35
TraesCS3D01G379100.3	Wheat	vacuole	77.35	63.96
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	65.67	56.22
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	32.34	49.24
GSMUA_Achr11P...	Banana	golgi, vacuole	56.13	48.23
KRH53267	Soybean	golgi, vacuole	46.58	46.92
KRH64633	Soybean	vacuole	46.44	46.84
VIT_18s0001g02220.t01	Wine grape	vacuole	53.56	46.25
Bra024237.1-P	Field mustard	vacuole	32.76	45.91
Bra029200.1-P	Field mustard	vacuole	47.01	45.83
CDY39845	Canola	vacuole	46.87	45.69
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	45.16	45.61
AT5G63800.1	Thale cress	vacuole	46.44	45.4
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	52.85	45.19
KRH40964	Soybean	golgi, vacuole	45.3	45.17
CDX84445	Canola	vacuole	46.15	45.0
PGSC0003DMT400023852	Potato	extracellular	39.89	44.52
CDY31349	Canola	vacuole	46.87	44.4
KRH63978	Soybean	golgi, vacuole	44.87	43.93
KRH53958	Soybean	golgi, vacuole	44.3	43.38
Solyc11g018490.1.1	Tomato	cytosol	46.58	43.31
AT1G77410.3	Thale cress	golgi, vacuole	50.57	43.29
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	44.44	43.09
CDY43756	Canola	cytosol, nucleus, peroxisome	28.06	38.63
Zm00001d044290_P005	Maize	golgi, vacuole	44.44	37.59
Zm00001d053225_P005	Maize	golgi, vacuole	43.02	35.7
Zm00001d046357_P001	Maize	extracellular	36.61	35.6
Zm00001d048440_P003	Maize	vacuole	43.45	35.1
Zm00001d032022_P003	Maize	golgi, vacuole	42.31	34.94
Zm00001d028474_P002	Maize	vacuole	43.45	33.96
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	43.73	33.44
Zm00001d041880_P001	Maize	extracellular, plasma membrane	42.59	32.57
Zm00001d053585_P002	Maize	plastid	38.18	32.33
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	39.17	31.76
Zm00001d043393_P001	Maize	extracellular	36.89	31.51
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	38.18	30.77
Zm00001d022621_P005	Maize	vacuole	37.46	29.42

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6N5U0	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	ProteinID:ONM35988.1
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF118	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000843D3D5	EnsemblPlantsGene:Zm00001d042656
EnsemblPlants:Zm00001d042656_P001	EnsemblPlants:Zm00001d042656_T001	SEG:seg	:	:	:

Description

Beta-galactosidase 16

Coordinates

chr3:-:175635248..175643043

Molecular Weight (calculated)

77920.9 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.213

Length

702 amino acids

Sequence
(BLAST)

001: MTGAGVATVA MVVVAALAAA GRGAGGERGN TTAGRGEVTY DGRALILDGA RRMLFSGDMH YPRSTPEMWP DLIAKAKKGG LDVIQTYVFW NAHEPVQGQF
101: NFEGRYDLVK FIREIHAQGL YVSLRIGPFV ESEWKYGGLP FWLRGIPNIT FRSDNEPFKR HMQKFVTKIV NLMKDERLFY PQGGPIIISQ IENEYKLVEA
201: AFHSKGSSYV HWAAAMAVNL QTGVPWMMCK QDDAPDPIYH GGTNFGRVAS SYVTTSYYDG APLDEYGLIW QPTWAHLREL HAAVKQSAET LLWGAYSNHS
301: FGQQQEGHVF ATDSGCVAFL VNFDMHKVST IQFGEGVFQL APKSISILSQ CRDLIFETGK INAQHGLRTA QVVQPLNHAH RWKLFKEPIP AVPSKISHVK
401: NQLCEHLSTT KDETDYLWYL SMYNSRRNEN GDLVLNVEAH AHILHAFINN DYVGSVHGSH DKPGNIVLNV SISLREGQNS ISLLCVMVGS PVGLYGETNK
501: IYTSEGSSHA EWTAFSKSIH LPLIWYKTTF DAPWGNDPVT LNLTSMGKGE VWINGQSIGR YHIPRYFLKT GENLLVLMEE TGGDPLQITV NTMSITRIYG
601: TVSEFSTPSL LSRENHPAVH LRCEKGKHIT DIEFASFGNP VQDCRGSGQS CQGSCHAEIS EFVVKNACLG RRKCVLPVWA NKFGGDPCPR IEKSLSVAAI
701: CG

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.