CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53267	Soybean	golgi, vacuole	95.55	95.41
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	63.51	63.6
KRH40964	Soybean	golgi, vacuole	62.36	61.65
KRH63978	Soybean	golgi, vacuole	63.07	61.23
PGSC0003DMT400023852	Potato	extracellular	55.03	60.89
KRH53958	Soybean	golgi, vacuole	61.78	59.97
VIT_18s0001g02220.t01	Wine grape	vacuole	64.94	55.6
Solyc11g018490.1.1	Tomato	cytosol	59.77	55.1
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	64.8	54.93
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	56.61	54.42
KRH12385	Soybean	vacuole	51.29	49.51
KRH37385	Soybean	nucleus	51.15	49.38
GSMUA_Achr11P...	Banana	golgi, vacuole	57.18	48.71
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	56.61	48.05
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.75	47.94
KRH15132	Soybean	mitochondrion, nucleus	50.0	47.54
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	51.44	47.48
TraesCS1B01G278400.1	Wheat	plastid	56.18	47.45
Os05t0428100-00	Rice	golgi, vacuole	55.17	47.35
KRH05876	Soybean	nucleus	49.71	47.27
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	55.17	46.83
KRH61101	Soybean	nucleus	49.43	46.74
HORVU1Hr1G065290.7	Barley	vacuole	54.89	46.47
Zm00001d042656_P001	Maize	golgi, vacuole	46.84	46.44
KXG22057	Sorghum	vacuole	55.17	45.93
TraesCS3A01G386100.3	Wheat	vacuole	54.45	45.61
TraesCS3B01G418200.1	Wheat	vacuole	54.17	45.26
TraesCS3D01G379100.3	Wheat	vacuole	54.31	44.52
KRH51779	Soybean	vacuole	44.25	43.2
KRH44153	Soybean	nucleus	51.58	42.59
KRH47126	Soybean	nucleus	51.15	42.13
KRH10007	Soybean	nucleus	50.29	41.67
KRH22910	Soybean	nucleus	50.0	41.43
KRG89008	Soybean	nucleus	49.57	41.27
KRH23324	Soybean	vacuole	49.71	41.14
KRH08131	Soybean	nucleus	49.86	40.92
KRH69834	Soybean	extracellular, golgi	49.86	40.92
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	49.28	40.88
KRH24309	Soybean	golgi, vacuole	49.43	40.81
KRH26431	Soybean	golgi, vacuole	49.14	40.71
KRH02714	Soybean	golgi, vacuole	48.99	40.64
KRH76716	Soybean	nucleus	49.57	40.64
KRH29286	Soybean	extracellular, golgi, vacuole	49.14	40.62
KRH60700	Soybean	extracellular, golgi, vacuole	49.14	40.52
KRH28740	Soybean	nucleus	49.28	40.21
KRH29942	Soybean	extracellular, golgi, vacuole	48.13	39.98
KRH63980	Soybean	vacuole	47.7	39.38
KRH19351	Soybean	extracellular, golgi, vacuole	46.41	39.06
KRH53957	Soybean	nucleus	47.27	38.93
KRH70131	Soybean	vacuole	46.41	38.68
KRH07365	Soybean	extracellular, golgi, vacuole	45.69	38.5
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	45.69	38.22
KRH48710	Soybean	vacuole	46.41	38.18
KRH48708	Soybean	vacuole	46.26	38.06
KRH02579	Soybean	extracellular, golgi, vacuole	45.98	37.91
KRH06832	Soybean	mitochondrion	38.07	35.33
KRH42784	Soybean	nucleus	45.69	34.98
KRH38266	Soybean	cytosol, peroxisome	27.59	32.82

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100780980
Gene3D:2.60.120.260	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EMBL:ACUP02002770	EnsemblPlantsGene:GLYMA_04G247300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:K7KM60	EnsemblPlants:KRH64633	ProteinID:KRH64633
ProteinID:KRH64633.1	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118
MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000233A501

Description

hypothetical protein

Coordinates

chr4:-:51443103..51452510

Molecular Weight (calculated)

78257.1 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.228

Length

696 amino acids

Sequence
(BLAST)

001: MVKVWWCFSF AFILIRVFIG AVYGDNVTYD GRSLIIDGQH KILFSGSIHY PRSTPQMWPN LIAKAKEGGL DVIQTYVFWN LHEPQQGQYD FRGMRNIVRF
101: IKEIQAQGLY VTLRIGPYIE SECTYGGLPL WLHDIPGIVF RSDNEQFKFH MQRFTAKIVN LMKSANLFAS QGGPIILSQI ENEYGNVEGA FHEKGLSYIR
201: WAAQMAVGLQ TGVPWVMCKQ DNAPDPVINT CNGMQCGKTF KGPNSPNKPS LWTENWTSFY QVFGEVPYIR SAEDIAYNVA LFIAKRGSYV NYYMYHGGTN
301: FDRIASAFVV TAYYDEAPLD EYGLVREPKW GHLKELHEAI KSCSNSLLYG TQTSFSLGTQ QNAYVFRRSS IECAAFLENT EDRSVTIQFQ NIPYQLPPNS
401: ISILPDCKNV AFNTAKVRAQ NARAMKSQLQ FNSAEKWKVY REAIPSFADT SLRANTLLDQ ISTAKDTSDY LWYTFRLYDN SANAQSILSA YSHGHVLHAF
501: VNGNLVGSKH GSHKNVSFVM ENKLNLISGM NNISFLSATV GLPNSGAYLE GRVAGLRSLK VQGRDFTNQA WGYQVGLLGE KLQIYTASGS SKVKWESFLS
601: STKPLTWYKT TFDAPVGNDP VVLNLGSMGK GYTWVNGQGI GRYWVSFHTP QGTPSQKWYH IPRSLLKSTG NLLVLLEEET GNPLGITLDT VYITSQ

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.