CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89008	Soybean	nucleus	88.42	88.64
KRH22910	Soybean	nucleus	84.84	84.64
KRH26431	Soybean	golgi, vacuole	83.05	82.86
VIT_06s0004g03020.t01	Wine grape	extracellular	78.88	78.13
CDY15749	Canola	golgi, vacuole	73.39	72.87
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	73.87	72.65
CDY31204	Canola	golgi, vacuole	73.15	72.63
Bra011946.1-P	Field mustard	golgi, vacuole	73.15	72.54
Bra000493.1-P	Field mustard	golgi, vacuole	72.91	72.39
CDY04567	Canola	golgi, vacuole	73.15	72.12
CDX83288	Canola	golgi, vacuole	72.67	72.07
Solyc11g069270.1.1	Tomato	extracellular	73.27	72.07
PGSC0003DMT400020941	Potato	extracellular	73.15	71.95
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	73.39	70.61
EER92534	Sorghum	endoplasmic reticulum, golgi	69.69	67.91
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	68.02	67.86
TraesCS4A01G083700.3	Wheat	extracellular	68.74	67.53
TraesCS4B01G220500.1	Wheat	golgi	68.02	66.82
TraesCS4D01G220800.2	Wheat	vacuole	68.38	66.09
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	68.38	65.94
Zm00001d028474_P002	Maize	vacuole	70.53	65.81
Os03t0255100-01	Rice	extracellular	68.85	60.36
KRH12385	Soybean	vacuole	49.28	57.28
KRH37385	Soybean	nucleus	49.16	57.14
KRH10007	Soybean	nucleus	55.25	55.12
KRH15132	Soybean	mitochondrion, nucleus	47.97	54.92
KRH23324	Soybean	vacuole	54.77	54.58
KRH05876	Soybean	nucleus	47.61	54.51
KRH08131	Soybean	nucleus	54.77	54.13
KRH47126	Soybean	nucleus	54.42	53.96
KRH61101	Soybean	nucleus	47.37	53.94
KRH44153	Soybean	nucleus	54.18	53.86
KRH69834	Soybean	extracellular, golgi	54.42	53.77
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	53.82	53.75
KRH76716	Soybean	nucleus	54.42	53.71
KRH28740	Soybean	nucleus	54.42	53.46
KRH02714	Soybean	golgi, vacuole	53.22	53.16
KRH63980	Soybean	vacuole	52.03	51.72
KRH19351	Soybean	extracellular, golgi, vacuole	50.84	51.51
KRH53957	Soybean	nucleus	51.67	51.24
KRH02579	Soybean	extracellular, golgi, vacuole	51.19	50.83
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	50.24	50.6
KRH42784	Soybean	nucleus	54.53	50.27
KRH51779	Soybean	vacuole	42.72	50.21
KRH07365	Soybean	extracellular, golgi, vacuole	48.33	49.03
KRH70131	Soybean	vacuole	48.69	48.86
KRH40964	Soybean	golgi, vacuole	40.57	48.3
KRH48710	Soybean	vacuole	48.69	48.23
KRH48708	Soybean	vacuole	48.69	48.23
KRH64633	Soybean	vacuole	39.98	48.13
KRH63978	Soybean	golgi, vacuole	40.81	47.7
KRH53267	Soybean	golgi, vacuole	39.62	47.63
KRH53958	Soybean	golgi, vacuole	40.69	47.56
KRH06832	Soybean	mitochondrion	40.69	45.47
KRH38266	Soybean	cytosol, peroxisome	31.5	45.13
KRH60700	Soybean	extracellular, golgi, vacuole	42.12	41.82
KRH24309	Soybean	golgi, vacuole	42.0	41.76
KRH29286	Soybean	extracellular, golgi, vacuole	41.89	41.69

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100793198
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EMBL:ACUP02006836	EnsemblPlantsGene:GLYMA_11G147900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	UniProt:I1LL69
InterPro:IPR000922	InterPro:IPR008979	EnsemblPlants:KRH29942	ProteinID:KRH29942	ProteinID:KRH29942.1	InterPro:Lectin_gal-bd_dom
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF72	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000233C6C4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:11401959..11408732

Molecular Weight (calculated)

91252.7 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.180

Length

838 amino acids

Sequence
(BLAST)

001: MRGTQILFVG LLWFFCVYAP SSFCANVTYD HRALVIDGKR RVLVSGSIHY PRSTPEMWPD LIQKSKDGGL DVIETYVFWN LHEPVQGQYN FEGRADLVKF
101: VKAVAAAGLY VHLRIGPYAC AEWNYGGFPL WLHFIPGIQF RTDNKPFEAE MKRFTVKIVD MMKQESLYAS QGGPIILSQV ENEYGNIDAA YGPAAKSYIK
201: WAASMATSLD TGVPWVMCQQ ADAPDPIINT CNGFYCDQFT PNSNAKPKMW TENWSGWFLS FGGAVPYRPV EDLAFAVARF YQRGGTFQNY YMYHGGTNFG
301: RTTGGPFIST SYDYDAPIDQ YGIIRQPKWG HLKDVHKAIK LCEEALIATD PTITSPGPNI EAAVYKTGSI CAAFLANIAT SDATVTFNGN SYHLPAWSVS
401: ILPDCKNVVL NTAKINSASM ISSFTTESFK EEVGSLDDSG SGWSWISEPI GISKSDSFSK FGLLEQINTT ADKSDYLWYS ISIDVEGDSG SQTVLHIESL
501: GHALHAFING KIAGSGTGNS GKAKVNVDIP VTLVAGKNSI DLLSLTVGLQ NYGAFFDTWG AGITGPVILK GLKNGSTVDL SSQQWTYQVG LKYEDLGPSN
601: GSSGQWNSQS TLPTNQSLIW YKTNFVAPSG SNPVAIDFTG MGKGEAWVNG QSIGRYWPTY VSPNGGCTDS CNYRGAYSSS KCLKNCGKPS QTLYHIPRSW
701: LQPDSNTLVL FEESGGDPTQ ISFATKQIGS MCSHVSESHP PPVDLWNSDK GRKVGPVLSL ECPYPNQLIS SIKFASFGTP YGTCGNFKHG RCRSNKALSI
801: VQKACIGSSS CRIGISINTF GDPCKGVTKS LAVEASCA

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.