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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G13750.1 KRH42483 AT2G01950.1 19000166
AT3G13750.1 KRH58580 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH47126 Soybean nucleus 97.86 97.63
KRH10007 Soybean nucleus 86.71 87.02
KRH23324 Soybean vacuole 86.24 86.44
VIT_09s0002g02120.t01 Wine grape golgi, vacuole 81.97 82.16
AT3G13750.1 Thale cress golgi, vacuole 79.72 79.34
Bra027403.1-P Field mustard golgi, vacuole 78.65 79.02
CDX97513 Canola golgi, vacuole 78.53 78.81
CDY23637 Canola golgi, vacuole 78.29 78.67
CDY51738 Canola golgi, vacuole 78.17 78.55
Solyc03g121540.2.1 Tomato nucleus 78.05 78.52
PGSC0003DMT400006654 Potato golgi, vacuole 77.82 78.28
CDY37486 Canola golgi, vacuole 77.34 77.71
PGSC0003DMT400012359 Potato golgi, vacuole 76.51 76.79
PGSC0003DMT400083896 Potato extracellular 75.92 76.65
Solyc06g062580.2.1 Tomato nucleus 76.28 76.46
Bra021506.1-P Field mustard vacuole 78.05 76.42
Solyc12g044880.1.1 Tomato golgi, vacuole 75.68 76.41
GSMUA_Achr6P00880_001 Banana golgi, vacuole 64.18 73.71
GSMUA_Achr7P08970_001 Banana vacuole 63.7 73.56
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 62.63 71.74
GSMUA_Achr7P08950_001 Banana golgi, vacuole 62.28 71.33
KRH12385 Soybean vacuole 60.85 71.15
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 70.7 71.04
KRH37385 Soybean nucleus 60.74 71.01
GSMUA_Achr6P35850_001 Banana golgi, vacuole 69.28 70.87
KRH02714 Soybean golgi, vacuole 70.23 70.56
Os01t0580200-01 Rice golgi, vacuole 69.04 70.37
GSMUA_Achr7P08940_001 Banana vacuole 60.97 70.22
OQU87043 Sorghum golgi, vacuole 68.45 69.77
Zm00001d044290_P005 Maize golgi, vacuole 68.45 69.52
TraesCS3B01G235100.1 Wheat golgi, vacuole 68.68 69.18
TraesCS3A01G208600.1 Wheat plastid 68.33 68.98
TraesCS3D01G211500.2 Wheat golgi, vacuole 68.33 68.98
HORVU3Hr1G050450.12 Barley golgi, vacuole 67.85 68.83
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 57.89 67.97
TraesCS7D01G359500.1 Wheat golgi 57.77 67.92
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 57.65 67.69
Os06t0573600-01 Rice plasma membrane, vacuole 57.18 67.41
TraesCS6A01G185400.1 Wheat golgi, vacuole 57.77 67.27
EER88554 Sorghum golgi, vacuole 57.77 67.17
KRH15132 Soybean mitochondrion, nucleus 58.24 67.08
Zm00001d046357_P001 Maize extracellular 57.3 66.9
TraesCS6B01G214100.1 Wheat golgi, vacuole 57.53 66.9
KRH05876 Soybean nucleus 57.89 66.67
TraesCS6D01G172400.1 Wheat golgi, vacuole 56.94 66.21
Os02t0219200-01 Rice peroxisome, vacuole 39.15 66.0
EES06516 Sorghum mitochondrion, plastid 57.41 65.41
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 57.41 64.79
KRH76716 Soybean nucleus 65.12 64.66
KRH61101 Soybean nucleus 56.35 64.54
HORVU6Hr1G039490.6 Barley plastid 58.13 64.14
KRH28740 Soybean nucleus 64.77 64.01
KRH08131 Soybean nucleus 63.82 63.44
GSMUA_Achr2P16780_001 Banana plastid 63.11 63.26
KRH69834 Soybean extracellular, golgi 63.35 62.97
KRH51779 Soybean vacuole 51.36 60.73
Zm00001d053585_P002 Maize plastid 56.82 57.78
KRH22910 Soybean nucleus 55.75 55.95
KRH26431 Soybean golgi, vacuole 54.8 55.0
KRG89008 Soybean nucleus 53.74 54.19
KRH29942 Soybean extracellular, golgi, vacuole 53.86 54.18
KRH63980 Soybean vacuole 52.43 52.43
KRH53957 Soybean nucleus 51.96 51.83
KRH64633 Soybean vacuole 42.59 51.58
KRH53267 Soybean golgi, vacuole 42.35 51.22
KRH40964 Soybean golgi, vacuole 41.87 50.14
KRH53958 Soybean golgi, vacuole 42.11 49.51
KRH63978 Soybean golgi, vacuole 41.87 49.23
KRH19351 Soybean extracellular, golgi, vacuole 47.69 48.61
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 47.69 48.32
KRH70131 Soybean vacuole 47.45 47.9
KRH02579 Soybean extracellular, golgi, vacuole 47.57 47.51
KRH42784 Soybean nucleus 50.65 46.97
KRH07365 Soybean extracellular, golgi, vacuole 45.79 46.73
KRH48710 Soybean vacuole 46.03 45.86
KRH48708 Soybean vacuole 46.03 45.86
KRH60700 Soybean extracellular, golgi, vacuole 44.01 43.96
KRH24309 Soybean golgi, vacuole 43.53 43.53
KRH06832 Soybean mitochondrion 38.55 43.33
KRH38266 Soybean cytosol, peroxisome 29.66 42.73
KRH29286 Soybean extracellular, golgi, vacuole 42.59 42.64
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23EntrezGene:100781074
Gene3D:2.60.120.260Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80EMBL:ACUP02004908EnsemblPlantsGene:GLYMA_08G193500
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030312
InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFUniProt:I1KUU7
InterPro:IPR000922InterPro:IPR008979EnsemblPlants:KRH44153ProteinID:KRH44153ProteinID:KRH44153.1InterPro:Lectin_gal-bd_dom
PFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PFscan:PS51257
PANTHER:PTHR23421PANTHER:PTHR23421:SF74MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTM
UniParc:UPI0002338B1BSEG:seg::::
Description
hypothetical protein
Coordinates
chr8:-:15577740..15584544
Molecular Weight (calculated)
93351.1 Da
IEP (calculated)
8.535
GRAVY (calculated)
-0.232
Length
843 amino acids
Sequence
(BLAST)
001: MSFNKLKVWN VPLLLVVFAC SLLGQASASV SYDHKAIIIN GQRRILLSGS IHYPRSTPEM WPDLIQKAKE GGLDVIQTYV FWNGHEPSPG KYYFGGNYDL
101: VRFIKLVQQA GLYVNLRIGP YVCAEWNFGG FPVWLKYIPG ISFRTDNGPF KFQMEKFTKK IVDMMKAERL FESQGGPIIL SQIENEYGPM EYEIGAPGRS
201: YTQWAAHMAV GLGTGVPWIM CKQDDAPDPI INTCNGFYCD YFSPNKAYKP KMWTEAWTGW FTEFGGAVPH RPAEDLAFSI ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP LDEYGLARQP KWGHLKDLHR AIKLCEPALV SGDSTVQRLG NYEEAHVFRS KSGACAAFLA NYNPQSYATV AFGNQHYNLP
401: PWSISILPNC KHTVYNTARV GSQSTTMKMT RVPIHGGLSW KAFNEETTTT DDSSFTVTGL LEQINATRDL SDYLWYSTDV VINSNEGFLR NGKNPVLTVL
501: SAGHALHVFI NNQLSGTAYG SLEAPKLTFS ESVRLRAGVN KISLLSVAVG LPNVGPHFER WNAGVLGPIT LSGLNEGRRD LTWQKWSYKV GLKGEALNLH
601: SLSGSSSVEW LQGFLVSRRQ PLTWYKTTFD APAGVAPLAL DMGSMGKGQV WINGQSLGRY WPAYKASGSC GYCNYAGTYN EKKCGSNCGE ASQRWYHVPH
701: SWLKPSGNLL VVFEELGGDP NGIFLVRRDI DSVCADIYEW QPNLVSYEMQ ASGKVRSPVR PKAHLSCGPG QKISSIKFAS FGTPVGSCGS YREGSCHAHK
801: SYDAFLKNCV GQSWCTVTVS PEIFGGDPCP RVMKKLSVEA ICT
Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.