Factsheet for GSMUA_Achr7P08970_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	93.29	92.53
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	91.78	91.03
GSMUA_Achr7P08940_001	Banana	vacuole	89.18	88.93
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	86.58	86.1
GSMUA_Achr2P16780_001	Banana	plastid	85.34	74.08
EER88554	Sorghum	golgi, vacuole	72.47	72.97
Zm00001d046357_P001	Maize	extracellular	72.05	72.85
CDX76255	Canola	extracellular	12.74	72.66
TraesCS6A01G185400.1	Wheat	golgi, vacuole	71.92	72.51
Os06t0573600-01	Rice	plasma membrane, vacuole	70.96	72.45
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	71.23	72.42
CDX88594	Canola	golgi, vacuole	32.19	72.31
TraesCS7D01G359500.1	Wheat	golgi	70.68	71.97
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	70.68	71.87
TraesCS6B01G214100.1	Wheat	golgi, vacuole	71.37	71.86
Os02t0219200-01	Rice	peroxisome, vacuole	49.04	71.6
TraesCS6D01G172400.1	Wheat	golgi, vacuole	71.1	71.59
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	65.34	71.19
Solyc12g008840.1.1	Tomato	extracellular	70.55	71.13
EES06516	Sorghum	mitochondrion, plastid	71.92	70.95
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	71.23	69.61
KRH12385	Soybean	vacuole	68.36	69.21
KRH37385	Soybean	nucleus	68.36	69.21
CDX94367	Canola	mitochondrion	67.4	69.1
HORVU6Hr1G039490.6	Barley	plastid	72.19	68.98
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	66.44	68.12
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	76.71	67.96
AT5G56870.1	Thale cress	vacuole	66.58	67.13
CDX95380	Canola	vacuole	66.71	66.99
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	67.12	66.94
CDY11899	Canola	golgi, vacuole	65.75	66.48
Bra006850.1-P	Field mustard	golgi, vacuole	65.48	66.2
CDX89360	Canola	mitochondrion	63.01	65.81
CDX92753	Canola	golgi, vacuole	63.97	65.59
CDX76254	Canola	golgi, nucleus, vacuole	52.6	65.31
CDY42755	Canola	vacuole	63.42	65.03
Bra019120.1-P	Field mustard	golgi, vacuole	63.42	65.03
CDY32919	Canola	golgi, vacuole	64.11	64.82
Bra035634.1-P	Field mustard	golgi, vacuole	63.97	64.68
AT4G26140.7	Thale cress	vacuole	66.71	64.67
CDY23637	Canola	golgi, vacuole	74.25	64.6
CDY20708	Canola	golgi, vacuole	63.84	64.54
Bra027403.1-P	Field mustard	golgi, vacuole	74.11	64.48
KRH10007	Soybean	nucleus	73.97	64.29
CDX97513	Canola	golgi, vacuole	73.97	64.29
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	73.84	64.09
CDY51738	Canola	golgi, vacuole	73.42	63.89
KRH44153	Soybean	nucleus	73.56	63.7
CDY37486	Canola	golgi, vacuole	73.15	63.65
KRH47126	Soybean	nucleus	73.56	63.55
KRH23324	Soybean	vacuole	72.88	63.26
AT3G13750.1	Thale cress	golgi, vacuole	73.15	63.05
Solyc03g121540.2.1	Tomato	nucleus	71.78	62.53
Solyc12g044880.1.1	Tomato	golgi, vacuole	71.37	62.4
Bra021506.1-P	Field mustard	vacuole	73.56	62.37
PGSC0003DMT400006654	Potato	golgi, vacuole	71.51	62.29
PGSC0003DMT400083896	Potato	extracellular	71.23	62.28
Zm00001d053585_P002	Maize	plastid	70.41	62.0
AT3G52840.2	Thale cress	golgi, vacuole	66.3	61.97
VIT_11s0016g02200.t01	Wine grape	vacuole	70.82	61.84
CDY69471	Canola	cytosol	35.07	61.54
CDY70594	Canola	cytosol	35.07	61.54
Solyc06g062580.2.1	Tomato	nucleus	70.68	61.36
PGSC0003DMT400012359	Potato	golgi, vacuole	70.55	61.31
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	70.0	60.91
KRH02714	Soybean	golgi, vacuole	69.86	60.79
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	67.12	57.44
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	65.89	55.41
GSMUA_Achr4P06620_001	Banana	cytosol	46.85	53.11
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	53.29	51.18
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	58.36	50.71
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	59.04	49.48
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	29.59	48.32
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.96	48.3
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.52	47.55
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.55	43.88
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	52.74	43.85
GSMUA_Achr11P...	Banana	golgi, vacuole	48.08	42.96
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	46.16	42.93
GSMUA_AchrUn_...	Banana	extracellular, vacuole	47.67	42.65
GSMUA_Achr1P14790_001	Banana	vacuole	47.53	42.06
GSMUA_Achr1P26480_001	Banana	vacuole	45.89	41.21
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	46.85	40.76
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	46.44	37.75

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr7G08970_001
EnsemblPlants:GSMUA_Achr7P08970_001	EnsemblPlants:GSMUA_Achr7T08970_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:M0TFY5	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0002952AB1
SEG:seg	:	:	:	:	:

Description

Beta-galactosidase [Source:GMGC_GENE;Acc:GSMUA_Achr7G08970_001]

Coordinates

chr7:-:7341834..7346943

Molecular Weight (calculated)

81110.3 Da

IEP (calculated)

8.132

GRAVY (calculated)

-0.253

Length

730 amino acids

Sequence
(BLAST)

001: MTLGCGRRLS TLLLLAVTLV VVSPPWLSSP VDASVSYDHK AIIINGQRRI LISGSIHYPR STPEMWPDLI QKAKDGGLDV IQTYVFWNGH EPSPGQYYFG
101: GNYDLVRFIK LVKQAGLYVH LRIGPYVCAE WNFGGFPVWL KYVPGINFRT DNGPFKAAMA KFTEKIVAMM KSEGLFESQG GPIILSQIEN EYGPVEYYGG
201: TAAKNYLSWA AQMAVGLNTG VPWVMCKQDD APDPVINACN GFYCDYFSPN KPYKPTMWTE AWTGWFTAFG GPVPHRPVED LAFAVARFIQ KGGSFVNYYM
301: YHGGTNFGRT AGGPFISTSY DYDAPIDEYG LLRQPKWGHL RDLHKAIKMC EPALVSGDPT VTKLGNYQEA HVYRSKSGSC AAFLSNFNPH SYASVTFNGM
401: KYNIPSWSIS ILPDCKTSVF NTAKVGAPTS QIKMTWVGGF SWESFSEDTN SLGDNSFTKD GLVEQISMTR DRTDYLWYTS YVNIDSNEQF LKNGRYPFLT
501: VMSAGHSMHV FINGERAGTV SGSLDNPKLT FRENVKLWAG SNKISILSVA VGLPNVGNHF ETWNAGVLGP VTLEGLNEGK RDLSSQKWIY QIGLRGESLS
601: IHTLSGSSSV EWGGASTKQP LTWYKAFFNA PAGNEPLALD MSSMGKGQIW INGQSIGRYW PAYKAYGSCD WCDYRGTYNE KKCQTNCGEP SQKWYHVPRA
701: WLNPTGNLLV VFEEWGGDPT GISMVKRVAL

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.