Factsheet for GSMUA_Achr4P25980_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	79.97	93.4
CDX98327	Canola	golgi, vacuole	26.82	66.14
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	75.61	59.62
CDY70160	Canola	vacuole	51.05	57.98
Os06t0628500-00	Rice	extracellular, golgi, vacuole	27.46	57.82
HORVU2Hr1G057440.2	Barley	vacuole	47.33	55.92
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	74.8	51.56
Solyc07g042220.1.1	Tomato	unclear	59.13	44.74
PGSC0003DMT400059880	Potato	cytosol	55.57	44.68
AT1G31740.1	Thale cress	vacuole	56.22	44.67
CDY28339	Canola	vacuole	56.22	44.16
CDY34975	Canola	golgi, plasma membrane, vacuole	56.22	44.16
CDY65885	Canola	vacuole	57.19	43.12
VIT_11s0016g00680.t01	Wine grape	vacuole	58.16	43.11
KRH19351	Soybean	extracellular, golgi, vacuole	57.19	42.81
CDX67790	Canola	vacuole	55.9	42.45
KRH07365	Soybean	extracellular, golgi, vacuole	56.54	42.37
KRH02579	Soybean	extracellular, golgi, vacuole	57.67	42.3
CDX93659	Canola	vacuole	55.57	42.05
HORVU1Hr1G003210.2	Barley	golgi, vacuole	55.25	41.35
HORVU1Hr1G003200.1	Barley	golgi, vacuole	55.41	41.33
Os10t0330600-01	Rice	extracellular	55.25	41.3
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	55.41	41.18
GSMUA_Achr7P08970_001	Banana	vacuole	48.3	40.96
TraesCS1A01G024100.1	Wheat	vacuole	54.77	40.94
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	55.57	40.9
Bra002325.1-P	Field mustard	golgi, vacuole	54.6	40.77
GSMUA_Achr7P08940_001	Banana	vacuole	48.14	40.71
TraesCS1D01G024200.1	Wheat	vacuole	54.44	40.65
AT5G20710.1	Thale cress	vacuole	54.12	40.56
TraesCS1B01G030400.1	Wheat	vacuole	54.28	40.43
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	47.98	40.35
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	47.82	40.22
CDX67763	Canola	golgi, plasma membrane, vacuole	50.08	40.21
EES03081	Sorghum	extracellular	53.8	40.12
KRH70131	Soybean	vacuole	54.12	40.12
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	47.5	40.05
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	53.63	39.9
Zm00001d043393_P001	Maize	extracellular	52.67	39.66
Os10t0340600-01	Rice	extracellular, golgi, vacuole	52.83	39.49
KRH48710	Soybean	vacuole	52.67	38.53
KRH48708	Soybean	vacuole	52.67	38.53
Bra003128.1-P	Field mustard	extracellular, vacuole	43.94	38.47
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	46.85	38.16
CDY32304	Canola	cytosol	53.47	37.53
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	50.89	37.5
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.1	37.3
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	52.18	37.08
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	47.82	35.92
KRH38266	Soybean	cytosol, peroxisome	33.76	35.73
CDY69031	Canola	cytosol, plastid, vacuole	35.7	35.59
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	48.95	34.91
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	47.98	34.82
GSMUA_Achr2P16780_001	Banana	plastid	46.69	34.36
KRH06832	Soybean	mitochondrion	40.71	33.6
CDY53917	Canola	plastid	55.57	33.43
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	46.37	32.69
GSMUA_Achr11P...	Banana	golgi, vacuole	42.0	31.82
GSMUA_Achr1P14790_001	Banana	vacuole	41.84	31.39
GSMUA_AchrUn_...	Banana	extracellular, vacuole	40.55	30.76
GSMUA_Achr1P26480_001	Banana	vacuole	40.39	30.75
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	40.39	29.8
GSMUA_Achr4P06620_001	Banana	cytosol	30.37	29.19

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	MapMan:21.3.2.2.2
Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr4G25980_001	EnsemblPlants:GSMUA_Achr4P25980_001
EnsemblPlants:GSMUA_Achr4T25980_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR008979	UniProt:M0SS59	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421
PANTHER:PTHR23421:SF88	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000296AF4C	:

Description

Beta-galactosidase 15 [Source:GMGC_GENE;Acc:GSMUA_Achr4G25980_001]

Coordinates

chr4:+:25282925..25286015

Molecular Weight (calculated)

70100.1 Da

IEP (calculated)

6.281

GRAVY (calculated)

-0.292

Length

619 amino acids

Sequence
(BLAST)

001: MEASKYLFFL LIASSLCCIA RSTTVSHDGR ALVIDGQRRI LFTGAIHYPR STPEMWPDLV QKSKEGGLDA IETYVFWNGH EPRRREYYFG GNYDLIRFLK
101: EVHNAGLYAI LRIGPYVCAE WNYGGLPVWL RQIPDIELRT DNQPWKVRMQ NFTTLIVDMV KQAGLFATQG GPIILAQIEN EFGNVETSYG DAGPRYVNWC
201: SQMADSLSID VPWIMCQQAD APQPMINTCN GFSGCDAFTP NNENSPKIWT ENWTGWFKNW GSPDPHRPAE ELAFQVARFF QTKGTLQNYY MYHGGTNFGR
301: TSGGPYIVTS YDYDAPLDEY GMSVQPKWGH LKELHASIKL MEKALTYGEV EEVNLDNELT ITKYSGDGVN PACFLSNQNS NLNATIDYEG STYFLPAWSV
401: SILPDCKSEV YNTAKVKTQT SLMVKKRNTA MEASEVLYWS WRPERLGISA KGFGSTFTVN NLLEQKSVTL DESDYLWYTT RQKEEFTLSV NTTGHILHAF
501: VNDRLVGSSQ YGLAGQLNFT FERKVWFNPG RNVISLLSAT VGLQNYGAYY DLAPTGIVGG PVKLIGENTT LDLSNYTWSY KVGVHHNTLL FQPHSSSILM
601: QVSHRLIMSI TIRLDWMVR

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.