Factsheet for TraesCS1D01G024200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G024100.1	Wheat	vacuole	97.35	97.46
TraesCS1B01G030400.1	Wheat	vacuole	97.35	97.11
HORVU1Hr1G003200.1	Barley	golgi, vacuole	93.61	93.49
HORVU1Hr1G003210.2	Barley	golgi, vacuole	92.28	92.5
HORVU2Hr1G057440.2	Barley	vacuole	57.18	90.46
Os06t0628500-00	Rice	extracellular, golgi, vacuole	29.19	82.31
Os10t0330600-01	Rice	extracellular	77.68	77.78
EES03081	Sorghum	extracellular	77.8	77.71
Zm00001d043393_P001	Maize	extracellular	76.0	76.64
Os10t0340600-01	Rice	extracellular, golgi, vacuole	73.94	74.03
CDX98327	Canola	golgi, vacuole	18.7	61.75
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	55.01	58.09
CDY70160	Canola	vacuole	36.55	55.6
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.65	54.44
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.26	53.58
CDX67790	Canola	vacuole	52.35	53.25
CDY65885	Canola	vacuole	52.59	53.11
CDX93659	Canola	vacuole	52.11	52.81
CDY28339	Canola	vacuole	49.94	52.54
AT1G31740.1	Thale cress	vacuole	49.1	52.25
CDY34975	Canola	golgi, plasma membrane, vacuole	49.58	52.16
VIT_11s0016g00680.t01	Wine grape	vacuole	51.99	51.62
PGSC0003DMT400059880	Potato	cytosol	47.53	51.17
CDY69031	Canola	cytosol, plastid, vacuole	38.12	50.89
Solyc07g042220.1.1	Tomato	unclear	50.06	50.73
KRH19351	Soybean	extracellular, golgi, vacuole	50.42	50.54
KRH07365	Soybean	extracellular, golgi, vacuole	50.3	50.48
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	54.64	50.45
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.39	50.27
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	50.42	50.18
AT5G20710.1	Thale cress	vacuole	49.58	49.76
KRH02579	Soybean	extracellular, golgi, vacuole	50.54	49.64
KRH48708	Soybean	vacuole	50.3	49.29
KRH48710	Soybean	vacuole	50.18	49.17
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	49.1	48.92
Bra002325.1-P	Field mustard	golgi, vacuole	48.73	48.73
KRH70131	Soybean	vacuole	48.73	48.38
Bra003128.1-P	Field mustard	extracellular, vacuole	41.25	48.37
TraesCS7D01G359500.1	Wheat	golgi	40.89	47.28
CDY32304	Canola	cytosol	49.94	46.94
KRH06832	Soybean	mitochondrion	42.46	46.93
TraesCS6D01G172400.1	Wheat	golgi, vacuole	40.17	45.93
TraesCS4D01G220800.2	Wheat	vacuole	46.56	44.52
KRH38266	Soybean	cytosol, peroxisome	31.36	44.44
TraesCS3D01G211500.2	Wheat	golgi, vacuole	43.55	43.23
TraesCS3D01G379300.2	Wheat	vacuole	43.06	42.3
TraesCS4D01G279400.4	Wheat	vacuole	42.94	41.98
TraesCS3D01G379200.1	Wheat	vacuole	42.34	41.59
CDY53917	Canola	plastid	49.82	40.14
TraesCS7D01G272600.1	Wheat	golgi, vacuole	40.17	39.64
TraesCS5D01G148400.1	Wheat	unclear	41.86	38.05
TraesCS5D01G336700.2	Wheat	vacuole	38.24	37.78
CDX67763	Canola	golgi, plasma membrane, vacuole	35.1	37.74
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	35.95	36.34
TraesCS3D01G379100.3	Wheat	vacuole	35.34	34.51

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0030246
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	PRINTS:PR00742
ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF68	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1D01G024200	EnsemblPlants:TraesCS1D01G024200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:10170017..10173644

Molecular Weight (calculated)

91933.7 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.335

Length

829 amino acids

Sequence
(BLAST)

001: MERAPLLPLL LLAAVALAAV SGTEVAYNDR ALVIDGERRI VISGSIHYPR STPEMWPDLI RKAKEGGLDA IETYVFWNGH EPRRREYNFE GSYDIVRFFK
101: EIQDAGMYAI LRIGPYICGE WNYGGLPAWL REISGMQFRM HNHPFEREME TFTTLIVDKL KEAKMFAGQG GPIILSQIEN EYGNIMGKLN NNESASEYIH
201: WCAAMANKQN VGVPWIMCQQ DDDVPSNVIN TCNGFYCHDW FPKRTDIPKI WTENWTGWFK AWDKPDFHRS AEDIAFSVAM FFQKRGSLQN YYMYHGGTNF
301: GRTSGGPYIT TSYDYDAPLD EYGNIRQPKY GHLKDLHNVL KSMEKILLHG DYKDTNMSST NVTMTKYTLD NSSACFISNK FDDKEVNVTL DTGATHVVPA
401: WSVSILPDCK TVAYNSAKIK TQTSVMVKRP EVETVRESLA WSWMPVNLQP FMTDEKGNFR KNELLEQIAT SGDQSDYLWY RTSFEHKGEA TYKLHVNTTG
501: HELYAFVNGK LVGKQHSPNG GFVFQMETPV KLHSGKNYIS LLSATIGLKN YGALFEMMPA GIVGGPVKLV DTVTNTTAYD LSNSSWSYKA GLAGEYRETH
601: LDKADDRSQW SGGLNGTIPV HRPFTWYKAT FEAPAGEEPV VADLLGLGKG VVWVNGNNLG RYWPSYVAAD MGGCKQCDYR GTFKAEGDGL KCLTGCNEPS
701: QRFYHVPRSF LKAGEPNTMV LFEEAGGDPT RVNLHTVAVG AACAEAAEVG DQVALACSHG RTISSVDVAS LGVARGKCGA YEGGCESKAA LAAFTAACVG
801: KESCTVPHTE DFRAGSGCDS GVLTVQATC

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.