Factsheet for GSMUA_Achr5P11850_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	83.85	95.92
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	51.56	74.8
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	43.32	73.4
CDX98327	Canola	golgi, vacuole	19.49	69.72
CDY70160	Canola	vacuole	36.53	60.18
Os06t0628500-00	Rice	extracellular, golgi, vacuole	19.49	59.52
HORVU2Hr1G057440.2	Barley	vacuole	33.63	57.63
PGSC0003DMT400059880	Potato	cytosol	48.0	55.97
VIT_11s0016g00680.t01	Wine grape	vacuole	52.0	55.93
CDY28339	Canola	vacuole	49.0	55.84
CDY34975	Canola	golgi, plasma membrane, vacuole	48.89	55.71
AT1G31740.1	Thale cress	vacuole	48.22	55.58
TraesCS1A01G024100.1	Wheat	vacuole	51.0	55.31
HORVU1Hr1G003210.2	Barley	golgi, vacuole	50.89	55.26
Solyc07g042220.1.1	Tomato	unclear	50.11	55.01
HORVU1Hr1G003200.1	Barley	golgi, vacuole	50.78	54.94
EES03081	Sorghum	extracellular	50.78	54.94
CDY65885	Canola	vacuole	50.11	54.81
CDX67790	Canola	vacuole	49.67	54.72
KRH19351	Soybean	extracellular, golgi, vacuole	50.33	54.66
TraesCS1D01G024200.1	Wheat	vacuole	50.45	54.64
TraesCS1B01G030400.1	Wheat	vacuole	50.33	54.39
Zm00001d043393_P001	Maize	extracellular	49.78	54.38
Os10t0330600-01	Rice	extracellular	50.11	54.35
CDX93659	Canola	vacuole	49.44	54.28
KRH02579	Soybean	extracellular, golgi, vacuole	51.0	54.27
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.45	53.86
KRH07365	Soybean	extracellular, golgi, vacuole	49.22	53.51
Os10t0340600-01	Rice	extracellular, golgi, vacuole	49.22	53.38
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	48.44	52.22
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	48.22	52.04
AT5G20710.1	Thale cress	vacuole	47.44	51.57
KRH70131	Soybean	vacuole	47.44	51.02
Bra003128.1-P	Field mustard	extracellular, vacuole	40.09	50.92
Bra002325.1-P	Field mustard	golgi, vacuole	46.99	50.9
CDY69031	Canola	cytosol, plastid, vacuole	35.08	50.72
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	41.2	50.55
KRH48710	Soybean	vacuole	47.55	50.47
KRH48708	Soybean	vacuole	47.55	50.47
CDY32304	Canola	cytosol	48.66	49.55
KRH38266	Soybean	cytosol, peroxisome	31.07	47.69
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	44.43	47.5
KRH06832	Soybean	mitochondrion	39.31	47.07
GSMUA_Achr7P08970_001	Banana	vacuole	37.75	46.44
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	37.97	46.33
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	44.88	46.27
GSMUA_Achr7P08940_001	Banana	vacuole	37.64	46.17
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	37.75	46.06
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	37.42	45.78
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	37.75	44.61
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	39.87	43.45
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	41.09	43.26
CDY53917	Canola	plastid	49.33	43.05
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	41.54	42.97
CDX67763	Canola	golgi, plasma membrane, vacuole	35.75	41.63
GSMUA_Achr1P26480_001	Banana	vacuole	37.42	41.33
GSMUA_Achr11P...	Banana	golgi, vacuole	37.53	41.25
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	39.98	40.89
GSMUA_Achr1P14790_001	Banana	vacuole	37.31	40.61
GSMUA_AchrUn_...	Banana	extracellular, vacuole	36.75	40.44
GSMUA_Achr4P06620_001	Banana	cytosol	28.62	39.91
GSMUA_Achr2P16780_001	Banana	plastid	37.31	39.83
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	35.52	38.02

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003779	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005515	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr5G11850_001	EnsemblPlants:GSMUA_Achr5P11850_001
EnsemblPlants:GSMUA_Achr5T11850_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	InterPro:IPR011684	InterPro:Lectin_gal-bd_dom	UniProt:M0SXR4	InterPro:NAB
PFAM:PF01301	PFAM:PF02140	PFAM:PF07765	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PFscan:PS51774	PANTHER:PTHR23421	PANTHER:PTHR23421:SF88	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI000296CFF8	SEG:seg	:	:	:	:

Description

Beta-galactosidase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr5G11850_001]

Coordinates

chr5:+:8583048..8588229

Molecular Weight (calculated)

99638.0 Da

IEP (calculated)

5.730

GRAVY (calculated)

-0.380

Length

898 amino acids

Sequence
(BLAST)

001: MEISKCCLLL LVASSLSYIV CSTTVSHDGR ALIIDGQRRV IFSGSIHYPR STPEMWPDLI RKSKEGGLDA IETYVFWNGH EPRRREYNFE GNYDLIRFLE
101: EVQNAGLYAI LRIGPYVCAE WNYGGLPVWL YKIPGMQTRT DNQPWKDEMQ NFTTLIVDKV KEERLLATQG GPIILLQIEN EYGNGDIEIR YGEAGHRYIN
201: WCANMAESLV SDVPWIMCQQ SDAPQPMINT CNGFSGCDGF TPNNGNSPKI WTENWTGSFK IWGSPHPHRP VEEVAFQVAR FFQSNGTVQN YYMYHGGTNF
301: GRTSGGPYIA TSYDYDAPLD EYGNIRQPKW GHLKELHASV KLMEKALTYG EVVEDHLGNG LTITKFSGDG IVPGCFLSNQ NSTVDATISF QGTNYFLPAW
401: SVSILPDCKK EVYNTAKVKT QTSIMVTKKD NAGDQSKDLR WSWKPERLHD SAKGFGNSFT VNKLLEQKTT TVDASDYLWY TTNVEVSKKE SFTLSVSTTG
501: HILYAFVNGR LVGSEYATGG TYNFIFERKV TFKPGKNQIS LLSATVGLSN YGAFYDNTPV GIVGGPVKLI GKNNTILDLS ESNWSYKIGL DGEVRKLQLD
601: EERWYSGVIP TKRPFTWYKT TFQAPLGSEP VVVDLLGLGK GEAWVNGNSL EASQRWYHVP RSFLKRGEPN TLTLFEEAGG DPNQVNFQTV TVGTACTSAG
701: EGDALSLSCQ GGRTISSVDF ATFGEPDGTC GDYESGGCGS DEAVAILKDA CLGRESCSIK ISDTIGTSCA KLASPRKLVG QAMAVARTCR SSTCPPWLQA
801: ALADIEQGVQ SLAVHVPDDP KSDSFAVRAE NDYQKLPQLI ALLHDLHHRY LYLADRYSQS LIRRHHHRAS SVPSDLNAED DPDRPDSTSF DTESSLSF

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.