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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid, vacuole
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67790 Canola vacuole 96.94 73.86
CDY34975 Canola golgi, plasma membrane, vacuole 89.86 70.81
CDY28339 Canola vacuole 89.37 70.43
CDX93659 Canola vacuole 90.34 68.58
CDY32304 Canola cytosol 88.24 62.13
CDY70160 Canola vacuole 53.95 61.47
CDY65885 Canola vacuole 79.87 60.41
AT1G31740.1 Thale cress vacuole 75.36 60.08
CDY53917 Canola plastid 89.69 54.13
PGSC0003DMT400059880 Potato cytosol 63.45 51.17
VIT_11s0016g00680.t01 Wine grape vacuole 64.73 48.14
Solyc07g042220.1.1 Tomato unclear 62.8 47.68
KRH19351 Soybean extracellular, golgi, vacuole 62.96 47.28
KRH02579 Soybean extracellular, golgi, vacuole 62.32 45.85
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 35.1 41.13
CDX76254 Canola golgi, nucleus, vacuole 38.81 40.99
GSMUA_Achr5P11870_001 Banana extracellular, golgi 51.05 40.38
GSMUA_Achr2P21790_001 Banana golgi, vacuole 53.46 39.48
CDY69471 Canola cytosol 26.25 39.18
CDY70594 Canola cytosol 26.25 39.18
CDX67763 Canola golgi, plasma membrane, vacuole 48.47 39.04
CDY43756 Canola cytosol, nucleus, peroxisome 31.88 38.82
TraesCS1A01G024100.1 Wheat vacuole 51.37 38.53
HORVU1Hr1G003210.2 Barley golgi, vacuole 51.21 38.45
TraesCS1B01G030400.1 Wheat vacuole 51.21 38.27
TraesCS1D01G024200.1 Wheat vacuole 50.89 38.12
HORVU1Hr1G003200.1 Barley golgi, vacuole 50.89 38.07
Os10t0330600-01 Rice extracellular 50.72 38.04
Os10t0340600-01 Rice extracellular, golgi, vacuole 50.72 38.04
Zm00001d043393_P001 Maize extracellular 50.08 37.83
EES03081 Sorghum extracellular 49.92 37.35
CDY59691 Canola cytosol, nucleus, vacuole 20.61 36.36
CDY59725 Canola cytosol 18.2 36.22
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 35.59 35.7
GSMUA_Achr5P11850_001 Banana extracellular, golgi 50.72 35.08
CDY15749 Canola golgi, vacuole 47.67 35.07
CDX83288 Canola golgi, vacuole 47.67 35.03
CDY70118 Canola cytosol 33.33 34.85
CDY31204 Canola golgi, vacuole 47.34 34.83
CDY04567 Canola golgi, vacuole 47.5 34.71
CDY23637 Canola golgi, vacuole 45.57 33.73
CDY36028 Canola plastid 38.65 33.71
CDX97513 Canola golgi, vacuole 45.57 33.69
CDY37486 Canola golgi, vacuole 45.25 33.49
CDY51738 Canola golgi, vacuole 45.09 33.37
CDY53959 Canola golgi, vacuole 39.13 33.29
CDY47949 Canola golgi, vacuole 38.97 33.15
HORVU2Hr1G057440.2 Barley vacuole 27.86 33.02
CDX95380 Canola vacuole 38.49 32.87
CDY43757 Canola golgi, vacuole 39.13 32.79
CDY42755 Canola vacuole 37.52 32.72
CDX84446 Canola golgi, vacuole 38.97 32.66
CDY59693 Canola vacuole 44.93 32.59
CDX92753 Canola golgi, vacuole 37.36 32.58
CDX75569 Canola golgi, vacuole 43.32 32.53
CDX94367 Canola mitochondrion 37.2 32.44
CDX69219 Canola vacuole 43.0 32.4
CDY11899 Canola golgi, vacuole 37.52 32.27
CDY20708 Canola golgi, vacuole 36.88 31.72
CDY32919 Canola golgi, vacuole 36.72 31.58
CDX89360 Canola mitochondrion 34.94 31.04
CDY19166 Canola golgi, vacuole 43.64 30.52
CDY23785 Canola vacuole 43.48 30.24
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 36.23 28.85
CDY39845 Canola vacuole 32.05 27.64
CDX75479 Canola vacuole 37.52 27.57
CDX69103 Canola vacuole 37.36 27.49
CDX84445 Canola vacuole 31.72 27.36
CDY40650 Canola vacuole 37.04 27.25
CDX72512 Canola vacuole 37.04 27.25
CDY31349 Canola vacuole 31.56 26.45
CDX88594 Canola golgi, vacuole 13.2 25.23
CDX72747 Canola vacuole 35.59 24.94
CDY02241 Canola golgi, vacuole 36.88 23.15
CDY22419 Canola cytosol 35.43 23.01
CDX89744 Canola vacuole 36.88 21.09
CDX98327 Canola golgi, vacuole 8.37 20.72
Os06t0628500-00 Rice extracellular, golgi, vacuole 8.05 17.01
CDX76255 Canola extracellular 0.0 0.0
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078JTR9UniProt:A0A078JTR9EnsemblPlants:CDY69031
ProteinID:CDY69031ProteinID:CDY69031.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00082549001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922
InterPro:IPR008979InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742PFscan:PS50228
PANTHER:PTHR23421PANTHER:PTHR23421:SF88MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445UniParc:UPI0004EDD27B
Description
BnaCnng61490DBnaCnng61490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTR9]
Coordinates
chrLK038478:-:1154..3913
Molecular Weight (calculated)
69405.4 Da
IEP (calculated)
7.017
GRAVY (calculated)
-0.494
Length
621 amino acids
Sequence
(BLAST)
001: MAQSLNVGVP WIMCQQNDAP QPMLNTCNGF YCDNFVPNNP NTPKMWTENW TGWFKQWGGK NPHRTTEDVA FSVARFFQRG GTFNNYYMYH GGTNFDRTAG
101: GPYITTSYDY DAPLDEYGNL NQPKYGHLKQ LHDVLHSMEK TLTYGNISTI DFGNSASATI YKTEEGSSCF FGNGNENSDA TISFRGESYV VPAWSITILP
201: DCKNEAYNTA KITTQTSMMV KKPNEAEDTP STLKWSWRPE NMDNFLLKGK GESTQTQLFD QKVVTNDQSD YLWYMTTVKF KKRDPFLGKN MSLRVNCTAH
301: VLHAFVNGKY IGNQHAENGK FNYIFEKDVK FKSGRNVIAL LSITVGLANY GAFFESKPAG ITGPISITGR NVDETIVKDL SAHKWSYKTG LNGFENQLFR
401: TESMSKWSVE SVPFNRTMTW YKATFNAPLG NDPVVVDLLG LGKGTAWVNG NNIGRYWPAF ISSENGCAAK CNYRGPYHAE KCLTNCGEPT QRWYHVPRSF
501: LNAEGDNTLV LFEEMGGNPS LVNFQTTRVG SVCANVYEKN TIELSCDRKP ISAIKFASFG NPDGNCGSFE KGTCESSNNT VDILTQECVG KEKCFIDVST
601: EKFGAPDCTG SARRLVVEAI C
Best Arabidopsis Sequence Match ( AT5G20710.2 )
(BLAST)
001: MANSLDIGVP WLMCQQPNAP QPMLETCNGF YCDQYEPTNP STPKMWTENW TGWFKNWGGK HPYRTAEDLA FSVARFFQTG GTFQNYYMYH GGTNFGRVAG
101: GPYITTSYDY HAPLDEFGNL NQPKWGHLKQ LHTVLKSMEK SLTYGNISRI DLGNSIKATI YTTKEGSSCF IGNVNATADA LVNFKGKDYH VPAWSVSVLP
201: DCDKEAYNTA KVNTQTSIMT EDSSKPERLE WTWRPESAQK MILKGSGDLI AKGLVDQKDV TNDASDYLWY MTRLHLDKKD PLWSRNMTLR VHSNAHVLHA
301: YVNGKYVGNQ FVKDGKFDYR FERKVNHLVH GTNHISLLSV SVGLQNYGPF FESGPTGING PVSLVGYKGE ETIEKDLSQH QWDYKIGLNG YNDKLFSIKS
401: VGHQKWANEK LPTGRMLTWY KAKFKAPLGK EPVIVDLNGL GKGEAWINGQ SIGRYWPSFN SSDDGCKDEC DYRGAYGSDK CAFMCGKPTQ RWYHVPRSFL
501: NASGHNTITL FEEMGGNPSM VNFKTVVVGT VCARAHEHNK VELSCHNRPI SAVKFASFGN PLGHCGSFAV GTCQGDKDAA KTVAKECVGK LNCTVNVSSD
601: TFGSTLDCGD SPKKLAVELE C
Arabidopsis Description
BGAL7Beta-galactosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV5]
SUBAcon: [vacuole,peroxisome,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.