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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28339 Canola vacuole 98.6 98.6
CDX98327 Canola golgi, vacuole 31.09 97.61
CDY70160 Canola vacuole 65.74 95.05
CDX67790 Canola vacuole 94.8 91.66
CDY69031 Canola cytosol, plastid, vacuole 70.81 89.86
CDX93659 Canola vacuole 91.24 87.9
AT1G31740.1 Thale cress vacuole 78.81 79.72
CDY65885 Canola vacuole 82.23 78.93
CDY32304 Canola cytosol 87.69 78.34
CDY53917 Canola plastid 93.78 71.82
PGSC0003DMT400059880 Potato cytosol 62.94 64.42
Solyc07g042220.1.1 Tomato unclear 66.24 63.81
VIT_11s0016g00680.t01 Wine grape vacuole 67.26 63.47
CDX67763 Canola golgi, plasma membrane, vacuole 61.8 63.16
KRH19351 Soybean extracellular, golgi, vacuole 65.74 62.64
CDX88594 Canola golgi, vacuole 25.63 62.15
KRH02579 Soybean extracellular, golgi, vacuole 65.1 60.78
CDX76255 Canola extracellular 9.39 57.81
Os06t0628500-00 Rice extracellular, golgi, vacuole 21.32 57.14
GSMUA_Achr5P11870_001 Banana extracellular, golgi 56.47 56.69
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 44.16 56.22
HORVU2Hr1G057440.2 Barley vacuole 37.18 55.92
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 37.31 55.47
GSMUA_Achr2P21790_001 Banana golgi, vacuole 55.71 52.2
HORVU1Hr1G003210.2 Barley golgi, vacuole 53.05 50.54
Zm00001d043393_P001 Maize extracellular 52.41 50.24
Os10t0330600-01 Rice extracellular 52.66 50.12
TraesCS1A01G024100.1 Wheat vacuole 52.66 50.12
HORVU1Hr1G003200.1 Barley golgi, vacuole 52.79 50.12
Os10t0340600-01 Rice extracellular, golgi, vacuole 52.54 50.0
TraesCS1B01G030400.1 Wheat vacuole 52.28 49.58
TraesCS1D01G024200.1 Wheat vacuole 52.16 49.58
EES03081 Sorghum extracellular 51.9 49.28
GSMUA_Achr5P11850_001 Banana extracellular, golgi 55.71 48.89
CDY15749 Canola golgi, vacuole 50.89 47.51
CDY36028 Canola plastid 42.89 47.47
CDY53959 Canola golgi, vacuole 43.78 47.26
CDX95380 Canola vacuole 43.53 47.18
CDY31204 Canola golgi, vacuole 50.38 47.04
CDY47949 Canola golgi, vacuole 43.53 46.99
CDX83288 Canola golgi, vacuole 50.38 46.98
CDY11899 Canola golgi, vacuole 43.02 46.95
CDY04567 Canola golgi, vacuole 50.63 46.94
CDX94367 Canola mitochondrion 42.26 46.77
CDX97513 Canola golgi, vacuole 49.62 46.55
CDX92753 Canola golgi, vacuole 42.01 46.49
CDY23637 Canola golgi, vacuole 49.49 46.48
CDY42755 Canola vacuole 41.62 46.07
CDY51738 Canola golgi, vacuole 48.98 46.01
CDY37486 Canola golgi, vacuole 48.98 46.01
CDY20708 Canola golgi, vacuole 42.13 45.98
CDY32919 Canola golgi, vacuole 42.01 45.84
CDX76254 Canola golgi, nucleus, vacuole 33.5 44.9
CDY43757 Canola golgi, vacuole 41.24 43.86
CDX89360 Canola mitochondrion 38.71 43.63
CDX84446 Canola golgi, vacuole 40.99 43.59
CDX75569 Canola golgi, vacuole 45.69 43.53
CDY59693 Canola vacuole 46.95 43.22
CDX69219 Canola vacuole 45.18 43.2
CDY39845 Canola vacuole 38.58 42.22
CDX84445 Canola vacuole 38.07 41.67
CDY31349 Canola vacuole 38.07 40.49
CDY19166 Canola golgi, vacuole 45.43 40.32
CDY23785 Canola vacuole 45.56 40.2
CDX69103 Canola vacuole 40.61 37.91
CDX75479 Canola vacuole 40.61 37.87
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 37.31 37.69
CDX72512 Canola vacuole 39.72 37.09
CDY40650 Canola vacuole 39.59 36.97
CDY43756 Canola cytosol, nucleus, peroxisome 23.73 36.67
CDY70594 Canola cytosol 18.91 35.82
CDY69471 Canola cytosol 18.91 35.82
CDX72747 Canola vacuole 38.71 34.42
CDY70118 Canola cytosol 25.0 33.16
CDY59725 Canola cytosol 12.69 32.05
CDY22419 Canola cytosol 38.71 31.9
CDY02241 Canola golgi, vacuole 39.97 31.85
CDY59691 Canola cytosol, nucleus, vacuole 14.09 31.53
CDX89744 Canola vacuole 39.85 28.91
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078H933UniProt:A0A078H933EnsemblPlants:CDY34975
ProteinID:CDY34975ProteinID:CDY34975.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798
GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00057560001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140
PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF88MetaCyc:PWY-6807
SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EDEFFC::
Description
BnaA01g27590DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078H933]
Coordinates
chrLK032344:+:107191..111250
Molecular Weight (calculated)
88406.7 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.390
Length
788 amino acids
Sequence
(BLAST)
001: MVSLRFLLCF LFVSSAYATI VSHDGRAITI DGHRRVLLSG SIHYPRSTPE MWPDLIKKGK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIQD
101: EGLYGVLRIG PYACAEWNYG GFPVWLHNMP GMVFRTTNKS FMDEMQNFTT MIVDMVKKEK LFASQGGPII LAQIENEYGN VMGPYGDSGK AYIKWCANMA
201: QSLDVGVPWI MCQQNDAPQP MLNTCNGFYC DNFVPNNPNT PKMWTENWTG WFKQWGGKNP HRTTEDVAFS VARFFQRGGT FNNYYMYHGG TNFDRTAGGP
301: YITTSYDYDA PLDEYGNLNQ PKYGHLKQLH DVLHSMERTL TYGNISTIDF GNSASATIYK TEEGSSCFFG NGNENSDAKI SFQGESYVIP AWSVTILPDC
401: KNEAYNTAKI TTQTSMMVKK PNEAEDTPST LKWSWRPENV DNFILKGKGE STQTQLFDQK VVTNDQSDYL WYMTTVKFKK RDLFLGKSMS LRVNSTAHVL
501: HAFVNGKHIG NQHAEDGKFN YVFEKDVKFK SGRNVIALLS ITVGLANYGI FFESKPAGIT GPIFITGRNG DETIVKDLSA HKWSYKTGLN GFENQLFRTE
601: SMSKWSVESV PFNRTMTWYK ATFKAPLGND PVVVDLMGLG KGAYHAEKCL TNCGEPTQRW YHVPRSFLNA EGDNTLVLFE EMGGNPSLVS FQTTRVGSVC
701: ANVYENKIIE LSCDRKPISA IKFASFGNPH GNCGSFEKGT CESSNNTVDI LTQECVGKEK CSIDVSTKKF GAPDCSGAAR KLAVEVIC
Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)
001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC
Arabidopsis Description
BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.