CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43757	Canola	golgi, vacuole	97.71	97.71
AT5G63810.1	Thale cress	golgi, vacuole	89.88	89.88
KRH63980	Soybean	vacuole	69.91	61.45
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	62.89	61.32
KRH53957	Soybean	nucleus	69.64	61.07
VIT_07s0031g02480.t01	Wine grape	extracellular	69.37	60.68
CDX88594	Canola	golgi, vacuole	25.51	58.15
Solyc03g019890.2.1	Tomato	nucleus	66.53	56.67
PGSC0003DMT400039333	Potato	extracellular, golgi	63.43	56.22
HORVU3Hr1G081970.1	Barley	vacuole	60.32	54.58
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	61.94	54.45
CDX76255	Canola	extracellular	9.31	53.91
TraesCS3B01G418400.2	Wheat	vacuole	61.27	53.79
TraesCS3D01G379300.2	Wheat	vacuole	61.0	53.55
TraesCS3A01G386300.1	Wheat	golgi, vacuole	60.73	53.51
HORVU3Hr1G081960.9	Barley	vacuole	60.73	53.19
CDX98327	Canola	golgi, vacuole	17.95	52.99
TraesCS3A01G386200.1	Wheat	vacuole	60.32	52.96
CDX94367	Canola	mitochondrion	50.88	52.95
TraesCS3D01G379200.1	Wheat	vacuole	60.19	52.84
CDY11899	Canola	golgi, vacuole	50.74	52.08
CDY32919	Canola	golgi, vacuole	50.61	51.94
CDY20708	Canola	golgi, vacuole	50.34	51.66
TraesCS3B01G418300.2	Wheat	vacuole	59.51	51.4
CDX92753	Canola	golgi, vacuole	49.12	51.12
CDX95380	Canola	vacuole	50.07	51.03
CDY36028	Canola	plastid	48.85	50.84
CDX89360	Canola	mitochondrion	47.91	50.79
CDY42755	Canola	vacuole	48.45	50.42
CDX76254	Canola	golgi, nucleus, vacuole	39.95	50.34
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	58.43	50.0
CDY53959	Canola	golgi, vacuole	49.26	50.0
CDY47949	Canola	golgi, vacuole	49.26	50.0
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	61.0	49.18
CDY70160	Canola	vacuole	35.09	47.71
CDY70594	Canola	cytosol	26.72	47.6
CDY69471	Canola	cytosol	26.45	47.12
CDY23637	Canola	golgi, vacuole	53.04	46.84
CDX97513	Canola	golgi, vacuole	53.04	46.79
CDY37486	Canola	golgi, vacuole	52.23	46.13
CDY51738	Canola	golgi, vacuole	52.09	46.01
CDX84445	Canola	vacuole	43.59	44.86
CDY15749	Canola	golgi, vacuole	51.01	44.79
CDY39845	Canola	vacuole	43.45	44.72
CDY04567	Canola	golgi, vacuole	50.74	44.24
CDX83288	Canola	golgi, vacuole	50.34	44.14
CDY31204	Canola	golgi, vacuole	50.2	44.08
CDX75569	Canola	golgi, vacuole	48.72	43.65
CDY31349	Canola	vacuole	43.59	43.59
CDY59693	Canola	vacuole	50.34	43.57
CDX69219	Canola	vacuole	48.45	43.57
CDY43756	Canola	cytosol, nucleus, peroxisome	29.28	42.55
CDX93659	Canola	vacuole	46.02	41.69
CDX67790	Canola	vacuole	45.75	41.6
CDY28339	Canola	vacuole	43.72	41.12
CDY34975	Canola	golgi, plasma membrane, vacuole	43.59	40.99
CDY65885	Canola	vacuole	45.34	40.93
CDY69031	Canola	cytosol, plastid, vacuole	32.66	38.97
CDY19166	Canola	golgi, vacuole	46.15	38.51
CDY23785	Canola	vacuole	46.29	38.41
CDY32304	Canola	cytosol	43.59	36.62
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	38.19	36.28
CDY59725	Canola	cytosol	15.25	36.22
CDX75479	Canola	vacuole	41.03	35.98
CDX69103	Canola	vacuole	40.76	35.78
CDY40650	Canola	vacuole	39.81	34.95
CDX72512	Canola	vacuole	39.68	34.83
CDX72747	Canola	vacuole	40.49	33.86
CDX67763	Canola	golgi, plasma membrane, vacuole	33.47	32.17
CDY70118	Canola	cytosol	25.64	31.99
CDY53917	Canola	plastid	43.99	31.68
CDY22419	Canola	cytosol	40.76	31.59
CDY02241	Canola	golgi, vacuole	39.27	29.42
CDY59691	Canola	cytosol, nucleus, vacuole	13.36	28.12
CDX89744	Canola	vacuole	39.54	26.98

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078D566	EnsemblPlants:CDX84446	ProteinID:CDX84446
ProteinID:CDX84446.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00141653001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF67	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	TMHMM:TMhelix
UniParc:UPI0004EE0C30	SEG:seg	:	:	:	:

Description

BnaC03g50540D

Coordinates

chrLK031837:+:1214744..1218937

Molecular Weight (calculated)

83077.0 Da

IEP (calculated)

8.945

GRAVY (calculated)

-0.364

Length

741 amino acids

Sequence
(BLAST)

001: MKRATKSIAS PAILVLAIVF LFSLKAIAVG NVTYDHRSLS IGGRRQLIIS AAIHYPRSVP AMWPSLVKTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: DIVKFIKTVQ QAGMHMILRI GPFVAAEWNF GGVPVWLHYV PETVFRQDNE PWKHYMESFT TYIVNLLKKE KLFAPQGGPI ILSQVENEYG YYERDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPA TVISTCNGFY CDEFTPNTAD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFQKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLTNL HKAIMLSENM LIGGEHRNFS LGPSLEADVY TSSSGSCAAF LSNSDDKNDK TAVFQNMTYH
401: LPAWSVSILP DCKNEVFNTA KVTAKSSKVE MLPEDLKSSS GLKWQVFSEK AGIWGEADFV KNELVDHINT TKDTTDYLWY TTSITISANE GFLKKQTLPV
501: LFIESKGHTL HVFINKDYLG TATGNGTHVP FKLKKSVPLK AGENNIDLLS MTVGLSNAGS FYEWVPAGLT SVSIKGLNNG TLNLTNTKWT YKLGVQGEHL
601: SLFKPGNSEA VKWTVTTKPP KKQPLTWYKV IIDPPSGSEP VGLDMLSMGK GMAWLNGEEI GRYWPRIARK NAPNDECVKE CDYRGKFMPD KCNTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGYPMK IKLSRRKVSE V

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.