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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43756 Canola cytosol, nucleus, peroxisome 70.0 98.82
Bra024237.1-P Field mustard vacuole 68.33 98.2
CDY39845 Canola vacuole 88.47 88.47
AT5G63800.1 Thale cress vacuole 86.53 86.77
CDY31349 Canola vacuole 88.61 86.1
VIT_07s0031g02590.t01 Wine grape extracellular, golgi, vacuole 43.19 67.46
KRH40964 Soybean golgi, vacuole 61.94 63.35
KRH53958 Soybean golgi, vacuole 61.25 61.51
KRH63978 Soybean golgi, vacuole 60.42 60.67
CDX98327 Canola golgi, vacuole 20.42 58.57
CDX88594 Canola golgi, vacuole 25.42 56.31
CDX76255 Canola extracellular 9.72 54.69
HORVU3Hr1G081980.9 Barley cytosol, vacuole 52.92 50.53
GSMUA_Achr11P... Banana golgi, vacuole 54.72 48.23
TraesCS1A01G267700.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.86 47.94
Os05t0428100-00 Rice golgi, vacuole 53.75 47.72
TraesCS1D01G267600.2 Wheat endoplasmic reticulum, extracellular, vacuole 54.31 47.68
TraesCS3A01G386100.3 Wheat vacuole 55.0 47.65
HORVU1Hr1G065290.7 Barley vacuole 54.17 47.45
TraesCS1B01G278400.1 Wheat plastid 54.17 47.33
TraesCS3B01G418200.1 Wheat vacuole 54.44 47.06
Zm00001d010212_P002 Maize endoplasmic reticulum, extracellular, golgi 53.47 46.95
TraesCS3D01G379100.3 Wheat vacuole 55.28 46.88
CDX94367 Canola mitochondrion 45.83 46.35
CDX95380 Canola vacuole 46.67 46.22
KXG22057 Sorghum vacuole 53.61 46.17
Zm00001d042656_P001 Maize golgi, vacuole 45.0 46.15
CDY11899 Canola golgi, vacuole 45.69 45.57
CDY20708 Canola golgi, vacuole 45.28 45.15
CDY32919 Canola golgi, vacuole 45.14 45.01
CDY70160 Canola vacuole 34.03 44.95
CDY36028 Canola plastid 44.31 44.8
CDX92753 Canola golgi, vacuole 44.03 44.52
CDY47949 Canola golgi, vacuole 45.0 44.38
CDY42755 Canola vacuole 43.89 44.38
CDY53959 Canola golgi, vacuole 44.72 44.11
CDX76254 Canola golgi, nucleus, vacuole 35.97 44.05
CDX84446 Canola golgi, vacuole 44.86 43.59
CDY43757 Canola golgi, vacuole 44.72 43.45
CDX89360 Canola mitochondrion 42.08 43.35
CDX97513 Canola golgi, vacuole 47.64 40.83
CDY51738 Canola golgi, vacuole 47.5 40.76
CDY23637 Canola golgi, vacuole 47.5 40.76
CDX75479 Canola vacuole 47.78 40.71
CDX69103 Canola vacuole 47.64 40.64
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 43.89 40.51
CDY37486 Canola golgi, vacuole 46.94 40.29
CDY15749 Canola golgi, vacuole 47.22 40.28
CDX75569 Canola golgi, vacuole 46.25 40.27
CDY04567 Canola golgi, vacuole 47.5 40.24
CDY59693 Canola vacuole 47.78 40.19
CDX69219 Canola vacuole 45.97 40.17
CDY40650 Canola vacuole 46.94 40.05
CDX72512 Canola vacuole 46.94 40.05
CDY31204 Canola golgi, vacuole 46.67 39.81
CDX83288 Canola golgi, vacuole 46.67 39.76
CDY28339 Canola vacuole 41.81 38.2
CDY34975 Canola golgi, plasma membrane, vacuole 41.67 38.07
CDX67790 Canola vacuole 42.78 37.79
CDX93659 Canola vacuole 42.78 37.65
CDY65885 Canola vacuole 42.92 37.64
CDY70594 Canola cytosol 21.53 37.26
CDX72747 Canola vacuole 45.83 37.25
CDY69471 Canola cytosol 21.25 36.78
CDY23785 Canola vacuole 43.89 35.39
CDY19166 Canola golgi, vacuole 43.61 35.36
CDY70118 Canola cytosol 28.89 35.02
CDY22419 Canola cytosol 46.11 34.73
CDY02241 Canola golgi, vacuole 46.94 34.18
CDY32304 Canola cytosol 41.11 33.56
CDY69031 Canola cytosol, plastid, vacuole 27.36 31.72
CDX89744 Canola vacuole 47.22 31.31
CDY59725 Canola cytosol 13.47 31.09
CDX67763 Canola golgi, plasma membrane, vacuole 32.78 30.61
CDY53917 Canola plastid 41.39 28.96
CDY59691 Canola cytosol, nucleus, vacuole 12.08 24.72
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078D5N3EnsemblPlants:CDX84445ProteinID:CDX84445ProteinID:CDX84445.1
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00141652001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421
PANTHER:PTHR23421:SF73MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EED197:::::
Description
BnaC03g50550D
Coordinates
chrLK031837:+:1206908..1213443
Molecular Weight (calculated)
80302.4 Da
IEP (calculated)
9.523
GRAVY (calculated)
-0.264
Length
720 amino acids
Sequence
(BLAST)
001: MVSDRCGSCW IILAMVLVLS AVGAGGATAE KGVTYDGRSL IIDGQRKLLF SGSIHYPRST PEMWPSLIKK TKEGGIEVID TYVFWNLHEP KLGQYDFNGR
101: NDLVKFIKEI RSQGLYVCLR IGPFIEAEWN YGGLPFWLRD VPGMVYRTDN EPFKFHMRRF TSKIVNLLKS EGLYASQGGP IILSQIENEY GNVQAAFREK
201: GASYVKWAAK MAVGLQTGVP WIMCKQPDAP DPVINTCNGM RCGETFPGPN SPNKPKMWTE DWTSFFQVYG APPYIRSAED IAFHAALFVA KNGSYINYYM
301: YHGGTNFGRT SSSYFITGYY DQAPLDEYGL LRQPKYGHLK ELHAAIKSTA NPLLHGKQTI LSLGPMQQAY VFEDARSGCV AFLVNNDGRK VIQIQFRNNA
401: YSLRPKSIGI LQNCKTLIYE TAKVNVPKNM RVTTPVHTFN VPDKWEVFRE TIPTFLGTSL RANTLLEHTK LTKDKTDYLW YTLRFKRDST CTKPSLFIES
501: SGHVVHVFVN NALAGSGHGS RDIRAVKLQV PVSLINGQNN ISILSGMVGL PDSGAYMESK SYGLTKAQIS CDGTKSIDLS RSQWGYSVGL LGEKVRIHQW
601: RNLKRVKWSN NNAGLIKNHP LAWYKTMFDA PSGDGPVGLN MESMGKGEMW VNGESIGRYW VSFLTPSGHP SQSIYHIPRA FLKPSGNLLV VLEEEGGDPL
701: GISLNTISVV GSNKSQSQLS
Best Arabidopsis Sequence Match ( AT5G63800.1 )
(BLAST)
001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS
Arabidopsis Description
BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.