Factsheet for TraesCS1A01G267700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G278400.1	Wheat	plastid	96.6	96.6
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	95.63	96.1
HORVU1Hr1G065290.7	Barley	vacuole	92.11	92.34
Os05t0428100-00	Rice	golgi, vacuole	78.64	79.9
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	78.16	78.54
KXG22057	Sorghum	vacuole	79.0	77.87
TraesCS3A01G386100.3	Wheat	vacuole	71.48	70.88
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	34.22	61.17
GSMUA_Achr11P...	Banana	golgi, vacuole	58.74	59.24
KRH40964	Soybean	golgi, vacuole	50.12	58.66
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	48.79	57.84
VIT_18s0001g02220.t01	Wine grape	vacuole	56.07	56.83
KRH64633	Soybean	vacuole	47.94	56.75
Bra024237.1-P	Field mustard	vacuole	34.47	56.69
KRH53267	Soybean	golgi, vacuole	47.94	56.67
KRH53958	Soybean	golgi, vacuole	49.27	56.62
KRH63978	Soybean	golgi, vacuole	49.15	56.49
PGSC0003DMT400023852	Potato	extracellular	42.6	55.8
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	48.66	55.39
Solyc11g018490.1.1	Tomato	cytosol	50.36	54.97
Bra029200.1-P	Field mustard	vacuole	47.94	54.86
CDX84445	Canola	vacuole	47.94	54.86
AT5G63800.1	Thale cress	vacuole	47.69	54.74
CDY39845	Canola	vacuole	47.69	54.58
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	54.37	54.57
AT1G77410.3	Thale cress	golgi, vacuole	53.64	53.9
CDY31349	Canola	vacuole	47.94	53.31
CDY43756	Canola	cytosol, nucleus, peroxisome	32.77	52.94
TraesCS3A01G208600.1	Wheat	plastid	46.36	45.75
TraesCS4A01G022500.2	Wheat	golgi, vacuole	46.36	45.26
TraesCS6A01G185400.1	Wheat	golgi, vacuole	39.68	45.17
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	38.84	44.57
TraesCS4A01G083700.3	Wheat	extracellular	45.63	44.08
TraesCS7A01G272400.2	Wheat	vacuole	45.15	43.61
TraesCS3A01G386300.1	Wheat	golgi, vacuole	41.75	40.9
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	41.38	40.64
TraesCS3A01G386200.1	Wheat	vacuole	41.38	40.4
TraesCS5A01G143600.4	Wheat	plasma membrane	44.05	39.85
TraesCS1A01G024100.1	Wheat	vacuole	36.65	36.47

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0030246
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G267700	EnsemblPlants:TraesCS1A01G267700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:-:462742731..462750383

Molecular Weight (calculated)

91419.6 Da

IEP (calculated)

6.615

GRAVY (calculated)

-0.210

Length

824 amino acids

Sequence
(BLAST)

001: MYAVGAVVAV ALIVLTAACA SAAAGDGRRV EEGGGDAARG EVTYDGRALV VDGTRRMLFS GEMHYTRSTP EMWPKLIASA RKGGLDVIQT YVFWNVHEPV
101: QGQYNFEGRY DLVKFIREIQ AQGLYVSLRI GPFIEAEWKY GGFPFWLHDV PNITFRTDNE PFKQHMQRFV TQIVNMMKKE GLYYPQGGPI IISQIENEYQ
201: MVEPAFGSGG PRYVRWAAEM AVGLQTGVPW MMCKQNDAPD PIINTCNGLI CGETFVGPNS PSKPALWTEN WTTRYPIYGN DTKLRSTEDI AFAVALFIAR
301: KKGSFVSYYM YHGGTNFGRF ASSYVTTSYY DGAPLDEYGL IWRPTWGHLK ELHAAVNLSS EPLLFGTYSS FSLGQEQEAH IFETELKCVA FLVNFDKHQS
401: PTVVFRNMSF QLAPKSISIL SECRTVVFET AKVTAQYGSR TAKAVESTND IHRWKAFKEP IPEDISKAAY TGNQLFEHLS MTKDETDYLW YIVSYEYRPS
501: DDGQLVLLNV ESRAHVLHAF VNTEYVGSVH GSHDGPGNII LNTNISLKEG QNTISLLSVM VGSPDSGAHM ERRSFGIRKV SIQQGQQPLY LLNNELWGYQ
601: VGLYGEGKRI YTQEEASSVE WTEINNLTYH PLTWYKTTFA APVGNDVVAL NLTSMGKGEV WVNGESIGRY WVSFKAPSGQ PSQSLYHIPQ HFLKPIDNLL
701: VLVEEIGGNP LEITLNTVSI TTVCGNVNEL SSPALHTQGK GPEVHLRCQR GKHISAIEFA SYGNPAGDCT TFSTGSCHAT LSESVVKQAC IGKRGCSIPV
801: SPARFGGDPC PGIQKSLLVV ANCR

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.