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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 6
  • extracellular 5
  • vacuole 6
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43756 Canola cytosol, nucleus, peroxisome 62.12 87.45
CDY39845 Canola vacuole 87.6 87.36
Bra029200.1-P Field mustard vacuole 86.91 86.67
CDX84445 Canola vacuole 86.77 86.53
Bra024237.1-P Field mustard vacuole 60.03 86.03
CDY31349 Canola vacuole 86.63 83.94
VIT_07s0031g02590.t01 Wine grape extracellular, golgi, vacuole 43.04 67.03
KRH40964 Soybean golgi, vacuole 62.95 64.2
KRH53958 Soybean golgi, vacuole 61.98 62.06
KRH63978 Soybean golgi, vacuole 61.14 61.23
HORVU3Hr1G081980.9 Barley cytosol, vacuole 52.65 50.13
AT1G77410.3 Thale cress golgi, vacuole 57.1 50.0
Os05t0428100-00 Rice golgi, vacuole 54.87 48.58
TraesCS3A01G386100.3 Wheat vacuole 55.99 48.38
Zm00001d010212_P002 Maize endoplasmic reticulum, extracellular, golgi 54.74 47.93
GSMUA_Achr11P... Banana golgi, vacuole 54.46 47.86
TraesCS1A01G267700.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.74 47.69
TraesCS1D01G267600.2 Wheat endoplasmic reticulum, extracellular, vacuole 54.18 47.44
TraesCS3B01G418200.1 Wheat vacuole 55.01 47.42
KXG22057 Sorghum vacuole 55.01 47.25
HORVU1Hr1G065290.7 Barley vacuole 54.04 47.2
TraesCS1B01G278400.1 Wheat plastid 54.04 47.09
TraesCS3D01G379100.3 Wheat vacuole 55.57 47.0
Zm00001d042656_P001 Maize golgi, vacuole 45.4 46.44
AT5G56870.1 Thale cress vacuole 46.8 46.41
AT1G45130.1 Thale cress golgi, vacuole 45.68 44.81
AT4G26140.7 Thale cress vacuole 45.82 43.69
AT5G63810.1 Thale cress golgi, vacuole 44.57 43.18
AT3G52840.2 Thale cress golgi, vacuole 46.8 43.02
AT4G36360.1 Thale cress endoplasmic reticulum, golgi, vacuole 48.47 40.65
AT3G13750.1 Thale cress golgi, vacuole 47.91 40.61
AT4G35010.1 Thale cress vacuole 47.77 40.59
AT2G16730.1 Thale cress extracellular, golgi, vacuole 47.63 40.33
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 47.49 40.02
AT1G31740.1 Thale cress vacuole 41.09 37.87
AT2G32810.1 Thale cress golgi, vacuole 45.13 36.53
AT5G20710.1 Thale cress vacuole 41.92 36.44
AT4G38590.2 Thale cress golgi, vacuole 44.43 30.32
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80EntrezGene:836500UniProt:A0A178URV0ProteinID:AED97799.1EMBL:AJ270302
EMBL:AK229786ArrayExpress:AT5G63800EnsemblPlantsGene:AT5G63800RefSeq:AT5G63800TAIR:AT5G63800RefSeq:AT5G63800-TAIR-G
EnsemblPlants:AT5G63800.1TAIR:AT5G63800.1Unigene:At.21611ProteinID:BAB10473.1GO:GO:0000003GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009791GO:GO:0009827GO:GO:0009987
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0030312GO:GO:0048046GO:GO:0048354
InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979
Symbol:MUM2RefSeq:NP_568978.2ProteinID:OAO95642.1PFAM:PF01301PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0006339PO:PO:0006340PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0009088PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF73
UniProt:Q9FFN4SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000009C842
Description
BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
Coordinates
chr5:+:25530055..25535889
Molecular Weight (calculated)
79763.5 Da
IEP (calculated)
9.108
GRAVY (calculated)
-0.247
Length
718 amino acids
Sequence
(BLAST)
001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.