Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 6
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94367 | Canola | mitochondrion | 85.52 | 90.45 |
| Bra019120.1-P | Field mustard | golgi, vacuole | 83.93 | 88.76 |
| CDX92753 | Canola | golgi, vacuole | 83.53 | 88.34 |
| CDY42755 | Canola | vacuole | 83.4 | 88.2 |
| Bra013956.1-P | Field mustard | cytosol, mitochondrion, plastid, vacuole | 85.26 | 87.7 |
| CDX89360 | Canola | mitochondrion | 80.08 | 86.27 |
| AT5G56870.1 | Thale cress | vacuole | 78.62 | 81.77 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 79.15 | 76.31 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 62.68 | 70.45 |
| KRH12385 | Soybean | vacuole | 66.67 | 69.63 |
| KRH37385 | Soybean | nucleus | 66.67 | 69.63 |
| Solyc12g008840.1.1 | Tomato | extracellular | 66.67 | 69.34 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 65.21 | 66.89 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 64.67 | 66.71 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 64.01 | 65.49 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 64.01 | 65.49 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 63.35 | 65.16 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 61.49 | 64.76 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 61.62 | 64.62 |
| TraesCS7D01G359500.1 | Wheat | golgi | 61.35 | 64.44 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 61.22 | 64.21 |
| Zm00001d046357_P001 | Maize | extracellular | 61.49 | 64.13 |
| EER88554 | Sorghum | golgi, vacuole | 61.49 | 63.86 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 60.29 | 62.71 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 61.75 | 62.25 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 59.89 | 62.21 |
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 59.63 | 61.93 |
| VIT_11s0016g02200.t01 | Wine grape | vacuole | 68.53 | 61.72 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 67.99 | 61.02 |
| AT1G45130.1 | Thale cress | golgi, vacuole | 59.23 | 60.93 |
| KRH02714 | Soybean | golgi, vacuole | 67.86 | 60.91 |
| EES06516 | Sorghum | mitochondrion, plastid | 59.23 | 60.27 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 39.44 | 59.4 |
| HORVU6Hr1G039490.6 | Barley | plastid | 60.03 | 59.16 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 66.53 | 59.15 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 64.94 | 58.15 |
| Zm00001d044290_P005 | Maize | golgi, vacuole | 64.01 | 58.07 |
| OQU87043 | Sorghum | golgi, vacuole | 63.74 | 58.04 |
| Os01t0580200-01 | Rice | golgi, vacuole | 63.48 | 57.8 |
| GSMUA_Achr6P35850_001 | Banana | golgi, vacuole | 62.68 | 57.28 |
| HORVU3Hr1G050450.12 | Barley | golgi, vacuole | 62.68 | 56.8 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 62.82 | 56.65 |
| TraesCS3A01G208600.1 | Wheat | plastid | 62.68 | 56.53 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 62.28 | 56.03 |
| Zm00001d053585_P002 | Maize | plastid | 58.83 | 53.44 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 58.7 | 51.64 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 49.93 | 50.74 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 27.89 | 46.98 |
| AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 52.86 | 46.71 |
| AT5G63800.1 | Thale cress | vacuole | 43.69 | 45.82 |
| AT1G31740.1 | Thale cress | vacuole | 44.22 | 42.75 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 49.93 | 42.39 |
| AT5G20710.1 | Thale cress | vacuole | 46.08 | 42.01 |
| AT1G77410.3 | Thale cress | golgi, vacuole | 44.09 | 40.49 |
| AT2G16730.1 | Thale cress | extracellular, golgi, vacuole | 41.83 | 37.15 |
| AT4G35010.1 | Thale cress | vacuole | 40.9 | 36.45 |
| AT4G38590.2 | Thale cress | golgi, vacuole | 39.84 | 28.52 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:828720 | UniProt:A0A1P8B849 | ProteinID:ANM67750.1 | ArrayExpress:AT4G26140 |
| EnsemblPlantsGene:AT4G26140 | RefSeq:AT4G26140 | TAIR:AT4G26140 | RefSeq:AT4G26140-TAIR-G | EnsemblPlants:AT4G26140.7 | Unigene:At.2962 |
| Symbol:BGAL12 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat |
| InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | RefSeq:NP_001329559.1 | PFAM:PF01301 |
| PRINTS:PR00742 | ScanProsite:PS01182 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF63 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000848B507 | SEG:seg | : | : |
Description
BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
Coordinates
chr4:-:13242993..13247927
Molecular Weight (calculated)
84207.3 Da
IEP (calculated)
8.184
GRAVY (calculated)
-0.323
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGNIKIGQT HPHGSLPLSS VKHFFVSGTA YGSLEKPKLT FSQKIKLHAG VNKLALLSTA AGLPNVGVHY ETWNTGVLGP VTLNGVNSGT
601: WDMTKWKWSY KIGTKGEALS VHTLAGSSTV EWKEGSLVAK KQPLTWYKST FDSPTGNEPL ALDMNTMGKG QMWINGQNIG RHWPAYTARG KCERCSYAGT
701: FTEKKCLSNC GEASQRWYHV PRSWLKPTNN LVIVLEEWGG EPNGISLVKR TAK
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGNIKIGQT HPHGSLPLSS VKHFFVSGTA YGSLEKPKLT FSQKIKLHAG VNKLALLSTA AGLPNVGVHY ETWNTGVLGP VTLNGVNSGT
601: WDMTKWKWSY KIGTKGEALS VHTLAGSSTV EWKEGSLVAK KQPLTWYKST FDSPTGNEPL ALDMNTMGKG QMWINGQNIG RHWPAYTARG KCERCSYAGT
701: FTEKKCLSNC GEASQRWYHV PRSWLKPTNN LVIVLEEWGG EPNGISLVKR TAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.