Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g018500.1.1 | Tomato | cytosol, golgi, vacuole | 54.02 | 63.74 |
| VIT_18s0001g02220.t01 | Wine grape | vacuole | 61.46 | 61.99 |
| PGSC0003DMT400023851 | Potato | nucleus, peroxisome, vacuole | 54.63 | 61.88 |
| Solyc11g018490.1.1 | Tomato | cytosol | 56.59 | 61.46 |
| VIT_18s0001g02230.t01 | Wine grape | golgi, vacuole | 61.22 | 61.14 |
| PGSC0003DMT400023852 | Potato | extracellular | 46.83 | 61.05 |
| AT5G63800.1 | Thale cress | vacuole | 50.0 | 57.1 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 54.02 | 54.22 |
| Os05t0428100-00 | Rice | golgi, vacuole | 53.41 | 54.01 |
| TraesCS1B01G278400.1 | Wheat | plastid | 53.9 | 53.64 |
| TraesCS1A01G267700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.9 | 53.64 |
| TraesCS1D01G267600.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.29 | 53.29 |
| HORVU1Hr1G065290.7 | Barley | vacuole | 53.29 | 53.16 |
| HORVU3Hr1G081980.9 | Barley | cytosol, vacuole | 48.78 | 53.05 |
| Zm00001d010212_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 53.05 | 53.05 |
| KXG22057 | Sorghum | vacuole | 52.93 | 51.91 |
| TraesCS3A01G386100.3 | Wheat | vacuole | 52.07 | 51.38 |
| TraesCS3B01G418200.1 | Wheat | vacuole | 51.95 | 51.14 |
| Zm00001d042656_P001 | Maize | golgi, vacuole | 43.29 | 50.57 |
| TraesCS3D01G379100.3 | Wheat | vacuole | 52.2 | 50.41 |
| AT5G56870.1 | Thale cress | vacuole | 40.61 | 45.99 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 47.32 | 45.33 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 46.59 | 45.1 |
| AT1G45130.1 | Thale cress | golgi, vacuole | 40.24 | 45.08 |
| AT4G35010.1 | Thale cress | vacuole | 46.22 | 44.85 |
| AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 46.46 | 44.72 |
| AT2G16730.1 | Thale cress | extracellular, golgi, vacuole | 45.98 | 44.46 |
| AT4G26140.7 | Thale cress | vacuole | 40.49 | 44.09 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 40.98 | 43.02 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 38.54 | 42.65 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 45.37 | 41.94 |
| AT1G31740.1 | Thale cress | vacuole | 39.27 | 41.34 |
| AT5G20710.1 | Thale cress | vacuole | 41.1 | 40.8 |
| AT4G38590.2 | Thale cress | golgi, vacuole | 43.78 | 34.13 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:844078 | UniProt:A0A1P8ANB0 | ProteinID:ANM58140.1 |
| ArrayExpress:AT1G77410 | EnsemblPlantsGene:AT1G77410 | RefSeq:AT1G77410 | TAIR:AT1G77410 | RefSeq:AT1G77410-TAIR-G | EnsemblPlants:AT1G77410.3 |
| Unigene:At.34478 | Symbol:BGAL16 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 |
| InterPro:Lectin_gal-bd_dom | RefSeq:NP_001320597.1 | PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | PFscan:PS50228 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF118 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0008485E90 | : | : | : | : | : |
Description
BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
Coordinates
chr1:-:29088697..29093264
Molecular Weight (calculated)
92197.0 Da
IEP (calculated)
9.500
GRAVY (calculated)
-0.361
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQLCA KQIENEYGMV GRAFRQEGKS
201: YVKWTAKLAV ELDTGVPWVM CKQDDAPDPL VNACNGRQCG ETFKGPNSPN KPAIWTENWT SFYQTYGEEP LIRSAEDIAF HVALFIAKNG SFVNYYMYHG
301: GTNFGRNASQ FVITSYYDQA PLDEYGLLRQ PKWGHLKELH AAVKLCEEPL LSGLQTTISL GKLQTAFVFG KKANLCAAIL VNQDKCESTV QFRNSSYRLS
401: PKSVSVLPDC KNVAFNTAKV NAQYNTRTRK ARQNLSSPQM WEEFTETVPS FSETSIRSES LLEHMNTTQD TSDYLWQTTR FQQSEGAPSV LKVNHLGHAL
501: HAFVNGRFIG SMHGTFKAHR FLLEKNMSLN NGTNNLALLS VMVGLPNSGA HLERRVVGSR SVKIWNGRYQ LYFNNYSWGY QVGLKGEKFH VYTEDGSAKV
601: QWKQYRDSKS QPLTWYKASF DTPEGEDPVA LNLGSMGKGE AWVNGQSIGR YWVSFHTYKG NPSQIWYHIP RSFLKPNSNL LVILEEEREG NPLGITIDTV
701: SVTEVCGHVS NTNPHPVISP RKKGLNRKNL TYRYDRKPKV QLQCPTGRKI SKILFASFGT PNGSCGSYSI GSCHSPNSLA VVQKACLKKS RCSVPVWSKT
801: FGGDSCPHTV KSLLVRAQCS
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQLCA KQIENEYGMV GRAFRQEGKS
201: YVKWTAKLAV ELDTGVPWVM CKQDDAPDPL VNACNGRQCG ETFKGPNSPN KPAIWTENWT SFYQTYGEEP LIRSAEDIAF HVALFIAKNG SFVNYYMYHG
301: GTNFGRNASQ FVITSYYDQA PLDEYGLLRQ PKWGHLKELH AAVKLCEEPL LSGLQTTISL GKLQTAFVFG KKANLCAAIL VNQDKCESTV QFRNSSYRLS
401: PKSVSVLPDC KNVAFNTAKV NAQYNTRTRK ARQNLSSPQM WEEFTETVPS FSETSIRSES LLEHMNTTQD TSDYLWQTTR FQQSEGAPSV LKVNHLGHAL
501: HAFVNGRFIG SMHGTFKAHR FLLEKNMSLN NGTNNLALLS VMVGLPNSGA HLERRVVGSR SVKIWNGRYQ LYFNNYSWGY QVGLKGEKFH VYTEDGSAKV
601: QWKQYRDSKS QPLTWYKASF DTPEGEDPVA LNLGSMGKGE AWVNGQSIGR YWVSFHTYKG NPSQIWYHIP RSFLKPNSNL LVILEEEREG NPLGITIDTV
701: SVTEVCGHVS NTNPHPVISP RKKGLNRKNL TYRYDRKPKV QLQCPTGRKI SKILFASFGT PNGSCGSYSI GSCHSPNSLA VVQKACLKKS RCSVPVWSKT
801: FGGDSCPHTV KSLLVRAQCS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.