Factsheet for Solyc11g018490.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	90.2	94.06
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	67.81	73.67
KRH53267	Soybean	golgi, vacuole	55.36	59.97
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	65.03	59.81
VIT_18s0001g02220.t01	Wine grape	vacuole	64.37	59.78
KRH64633	Soybean	vacuole	55.1	59.77
AT1G77410.3	Thale cress	golgi, vacuole	61.46	56.59
GSMUA_Achr11P...	Banana	golgi, vacuole	56.56	52.26
Os05t0428100-00	Rice	golgi, vacuole	56.03	52.16
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	54.83	50.49
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	54.7	50.37
TraesCS1B01G278400.1	Wheat	plastid	54.97	50.36
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.97	50.36
KXG22057	Sorghum	vacuole	55.5	50.12
HORVU1Hr1G065290.7	Barley	vacuole	54.44	50.0
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	48.48	48.54
TraesCS3A01G386100.3	Wheat	vacuole	52.19	47.41
Zm00001d042656_P001	Maize	golgi, vacuole	43.31	46.58
TraesCS3B01G418200.1	Wheat	vacuole	51.26	46.46
Solyc01g110000.2.1	Tomato	nucleus	44.24	45.94
TraesCS3D01G379100.3	Wheat	vacuole	51.39	45.7
Solyc12g008840.1.1	Tomato	extracellular	43.31	45.17
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.2	44.85
Solyc03g121540.2.1	Tomato	nucleus	49.4	44.51
Solyc12g044880.1.1	Tomato	golgi, vacuole	49.14	44.43
Solyc11g069270.1.1	Tomato	extracellular	49.27	43.66
Solyc04g080840.1.1	Tomato	extracellular, golgi	42.25	43.4
Solyc06g062580.2.1	Tomato	nucleus	48.21	43.28
Solyc02g078950.2.1	Tomato	vacuole	47.81	42.77
Solyc01g111540.2.1	Tomato	unclear	46.89	42.6
Solyc10g055470.1.1	Tomato	vacuole	46.36	42.22
Solyc03g019890.2.1	Tomato	nucleus	47.95	41.61
Solyc09g092160.2.1	Tomato	extracellular	46.09	39.01
Solyc07g042220.1.1	Tomato	unclear	42.12	38.88

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	UniProt:K4D6Q3
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:Solyc11g018490.1
EnsemblPlants:Solyc11g018490.1.1	UniParc:UPI000276AA60	:	:	:	:

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:K4D6Q3]

Coordinates

chr11:+:8611246..8616132

Molecular Weight (calculated)

84729.8 Da

IEP (calculated)

8.251

GRAVY (calculated)

-0.352

Length

755 amino acids

Sequence
(BLAST)

001: MWPSLISKAK EGGIDVIETY VFWNLHEPQP GQYDFSGRRD IVAFIKQIQA QGLYACLRIG PYIEAEWTYG GFPFWLHDVP GIVYRSDNEP FKFYMQNFTT
101: KIVNLMKSEG LYASQGGPII LSQIENEYQN KEKSFGEKGP PYVRWAAKMA VELDTGVPWI MCKQDDAPDP VINTCNGRTC GETFKGPNSP NKPSIWTENW
201: TSFYQVYGEN AVKRSAEEMA YQVALFIARK NGTYINYYMY HGGTNFGRSA AEFMITSYYD LAPLDEYGLI SQPKYGHFKE LHAAIKLCSE NILSTFPTMH
301: SLGPLQEVYV YGEDSGTKCS ALLVNTDHSN KNITVKFRDL TYQLPPKSIS ILPDCKTVVF NTAKVSTQFN TRSPTTVFKF DRAEKWEQFH EIIPQFDATT
401: VRSETLLEQT NTTKDVSDYL WYTASLEQES EEEQVKLSVK SLGHVLHVFV NGHLVGYGHG QFRKASFLVE STVSLKKGKN QISFLSATVG LPNSGAFLER
501: RSLGVHSVMI QLDNRVLKNF TDFSWGYQVG LLGEKLQIYS SGRTKSGNWS RLGSSKQQLT WYKSIFDAPK GDDPVTLNLG SMGKGEVWVN GQSIGRFWLS
601: FHTPQGVPSQ TWYNVPRSFL KPKDNVLVLF EEEIGNPLGI TIDTISITKV CAHVADSNPP PVINSWRKHG RRPKVQLSCP QGRKISKILF ASFGNPIGDC
701: DDYDIGLCHS SNSKAIVEKA CLGKSKCTIA HSSKKFGGDP CPGISKSLLV DVQCK

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.