Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057597 | Potato | golgi, vacuole | 78.2 | 95.24 |
| Solyc11g069270.1.1 | Tomato | extracellular | 55.69 | 55.16 |
| Solyc01g110000.2.1 | Tomato | nucleus | 45.14 | 52.41 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 51.42 | 51.98 |
| Solyc12g008840.1.1 | Tomato | extracellular | 44.55 | 51.93 |
| Solyc04g080840.1.1 | Tomato | extracellular, golgi | 45.02 | 51.7 |
| Solyc03g121540.2.1 | Tomato | nucleus | 51.3 | 51.67 |
| Solyc06g062580.2.1 | Tomato | nucleus | 50.71 | 50.89 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 50.83 | 50.77 |
| Solyc11g018500.1.1 | Tomato | cytosol, golgi, vacuole | 40.52 | 49.21 |
| Solyc11g018490.1.1 | Tomato | cytosol | 42.77 | 47.81 |
| Solyc03g019890.2.1 | Tomato | nucleus | 48.58 | 47.13 |
| Solyc09g092160.2.1 | Tomato | extracellular | 49.76 | 47.09 |
| Solyc07g042220.1.1 | Tomato | unclear | 43.6 | 44.99 |
| Solyc01g111540.2.1 | Tomato | unclear | 43.36 | 44.04 |
| Solyc10g055470.1.1 | Tomato | vacuole | 41.82 | 42.58 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS |
| InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | UniProt:K4B9B9 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF72 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g078950.2 | EnsemblPlants:Solyc02g078950.2.1 |
| UniParc:UPI000276868E | SEG:seg | : | : | : | : |
Description
Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:K4B9B9]
Coordinates
chr2:-:43558086..43564091
Molecular Weight (calculated)
94263.7 Da
IEP (calculated)
6.540
GRAVY (calculated)
-0.216
Length
844 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKKLLLVI ILSMLLVFEK GASTTVTYDH KALVIDGKRR ILQSGSIHYP RTTPEIWPEI IRKAKEGGLD VIESYVFWNY HEPVKGEYYF EGRFDLVRFV
101: KTVQEAGLYV HLRIGPYACA EWNYGGFPMW LHFIPGIKFR TTNELFKESN EMKLFLAKIV DLMKDENLFA TQGGPIILAQ VENEYGNVEW AYGVSGELYV
201: KWAAETAVNL NTTVPWVMCA QEDAPDSVIN TCNGFYCDRF TPNSLSKPKM WTENYVGWFL AFGYPVPFRP VEDLAFAVAR FFETGGTFQN YYMYFGGTNF
301: GRTAGGPLVA TSYDYDAPID EYGFISQPKW GHLRDLHKAI KHCEEYLVNA DPIHLSLGLK LEAHVYYKSS NDCAAFLANY GNSSDANVTF NGKSYFLHAW
401: SVSILPDCKN VIFNTAKVVS QKTTGSTAFT HNTVTIENSL ESDPWGWYQE KVGIANNHSF ASPRLLEQIN TTKDTSDFLW YTTSINVEEN IKKRKAKELQ
501: LMVGSLGHAA LVFVNKKPVG FGYGNHDDAS FVLSKKIHLK QGNNTVDILS MMVGLQNYGP WFDISGAGVF SVIFSDLKNS KNFSSTEWIY QVGLEGEYLG
601: LDKVSLANSS LWIQGSSVPV HQSLIWYKTS FSPPEGRGPI SLNLSSMGKG QAWVNGQHIG RYWSSYRSPS TGCSDNCDYR GAYDSWKCLK KCGQPAQVLY
701: HVPRSWLKPE KNLLVLHEEL GGDPSKISFS TRSGQTICAH VSELDPPPVD TWKTDKDQTS QEPSLQLNCE QGWTITAVNF ASFGTPTGDC GAFIEGSCHW
801: DVLSIVHQGC VGKSGCSIPI TMAKLGDPCP GVQKSLAVEA FCSV
101: KTVQEAGLYV HLRIGPYACA EWNYGGFPMW LHFIPGIKFR TTNELFKESN EMKLFLAKIV DLMKDENLFA TQGGPIILAQ VENEYGNVEW AYGVSGELYV
201: KWAAETAVNL NTTVPWVMCA QEDAPDSVIN TCNGFYCDRF TPNSLSKPKM WTENYVGWFL AFGYPVPFRP VEDLAFAVAR FFETGGTFQN YYMYFGGTNF
301: GRTAGGPLVA TSYDYDAPID EYGFISQPKW GHLRDLHKAI KHCEEYLVNA DPIHLSLGLK LEAHVYYKSS NDCAAFLANY GNSSDANVTF NGKSYFLHAW
401: SVSILPDCKN VIFNTAKVVS QKTTGSTAFT HNTVTIENSL ESDPWGWYQE KVGIANNHSF ASPRLLEQIN TTKDTSDFLW YTTSINVEEN IKKRKAKELQ
501: LMVGSLGHAA LVFVNKKPVG FGYGNHDDAS FVLSKKIHLK QGNNTVDILS MMVGLQNYGP WFDISGAGVF SVIFSDLKNS KNFSSTEWIY QVGLEGEYLG
601: LDKVSLANSS LWIQGSSVPV HQSLIWYKTS FSPPEGRGPI SLNLSSMGKG QAWVNGQHIG RYWSSYRSPS TGCSDNCDYR GAYDSWKCLK KCGQPAQVLY
701: HVPRSWLKPE KNLLVLHEEL GGDPSKISFS TRSGQTICAH VSELDPPPVD TWKTDKDQTS QEPSLQLNCE QGWTITAVNF ASFGTPTGDC GAFIEGSCHW
801: DVLSIVHQGC VGKSGCSIPI TMAKLGDPCP GVQKSLAVEA FCSV
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.