Factsheet for Solyc09g092160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
golgi 4
mitochondrion 2
vacuole 4
extracellular 3
endoplasmic reticulum 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

extracellular: 22364583
nucleus: 25464976
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067956	Potato	extracellular	96.41	96.41
AT2G32810.1	Thale cress	golgi, vacuole	65.92	66.29
Bra021814.1-P	Field mustard	plastid	65.81	65.73
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	64.69	65.72
CDY19166	Canola	golgi, vacuole	65.25	65.54
CDY23785	Canola	vacuole	65.58	65.51
KRH42784	Soybean	nucleus	66.59	65.35
Os12t0429200-01	Rice	plasma membrane	62.56	60.72
EES16726	Sorghum	extracellular	62.56	60.45
TraesCS5D01G148400.1	Wheat	unclear	61.55	60.2
TraesCS5A01G143600.4	Wheat	plasma membrane	61.1	59.82
TraesCS5B01G142600.1	Wheat	unclear	60.76	59.5
Zm00001d041880_P001	Maize	extracellular, plasma membrane	61.21	59.48
HORVU5Hr1G045820.9	Barley	extracellular, plasma membrane, vacuole	59.53	58.29
Solyc12g008840.1.1	Tomato	extracellular	41.82	51.52
Solyc03g121540.2.1	Tomato	nucleus	48.21	51.31
Solyc11g069270.1.1	Tomato	extracellular	48.88	51.17
Solyc12g044880.1.1	Tomato	golgi, vacuole	47.31	50.54
Solyc01g110000.2.1	Tomato	nucleus	41.03	50.34
Solyc02g078950.2.1	Tomato	vacuole	47.09	49.76
Solyc06g062580.2.1	Tomato	nucleus	46.86	49.7
Solyc04g080840.1.1	Tomato	extracellular, golgi	40.36	48.98
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	46.19	48.76
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	37.11	47.63
Solyc03g019890.2.1	Tomato	nucleus	45.96	47.13
Solyc11g018490.1.1	Tomato	cytosol	39.01	46.09
Solyc07g042220.1.1	Tomato	unclear	39.46	43.03
Solyc01g111540.2.1	Tomato	unclear	39.24	42.12
Solyc10g055470.1.1	Tomato	vacuole	38.68	41.62

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	UniProt:K4CWP2	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785
SUPFAM:SSF51445	EnsemblPlantsGene:Solyc09g092160.2	EnsemblPlants:Solyc09g092160.2.1	TMHMM:TMhelix	UniParc:UPI000276B985	SEG:seg

Description

Beta-galactosidase 9 [Source:Projected from Arabidopsis thaliana (AT2G32810) UniProtKB/Swiss-Prot;Acc:Q9SCV3]

Coordinates

chr9:-:71305944..71320806

Molecular Weight (calculated)

99806.2 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.285

Length

892 amino acids

Sequence
(BLAST)

001: MVEAMSRRKT LNFPLILTVL TIHFVIVAGE YFKPFNVTYD NRALIIGGKR RMLISAGIHY PRATPEMWPT LIARSKEGGA DVIETYTFWN GHEPTRGQYN
101: FEGRYDIVKF AKLVGSHGLF LFIRIGPYAC AEWNFGGFPI WLRDIPGIEF RTDNAPFKEE MERYVKKIVD LMISESLFSW QGGPIILLQI ENEYGNVESS
201: FGPKGKLYMK WAAEMAVGLG AGVPWVMCRQ TDAPEYIIDT CNAYYCDGFT PNSEKKPKIW TENWNGWFAD WGERLPYRPS EDIAFAIARF FQRGGSLQNY
301: YMYFGGTNFG RTAGGPTQIT SYDYDAPLDE YGLLRQPKWG HLKDLHAAIK LCEPALVAAD SPQYIKLGPK QEAHVYRGTS NNIGQYMSLN EGICAAFIAN
401: IDEHESATVK FYGQEFTLPP WSVSILPDCR NTAFNTAKVG AQTSIKTVGS DSVSVGNNSL FLQVITKSKL ESFSQSWMTL KEPLGVWGDK NFTSKGILEH
501: LNVTKDQSDY LWYLTRIYIS DDDISFWEEN DVSPTIDIDS MRDFVRIFVN GQLAGSVKGK WIKVVQPVKL VQGYNDILLL SETVGLQNYG AFLEKDGAGF
601: KGQIKLTGCK SGDINLTTSL WTYQVGLRGE FLEVYDVNST ESAGWTEFPT GTTPSVFSWY KTKFDAPGGT DPVALDFSSM GKGQAWVNGH HVGRYWTLVA
701: PNNGCGRTCD YRGAYHSDKC RTNCGEITQA WYHIPRSWLK TLNNVLVIFE ETDKTPFDIS ISTRSTETIC AQVSEKHYPP LHKWSHSEFD RKLSLMDKTP
801: EMHLQCDEGH TISSIEFASY GSPNGSCQKF SQGKCHAANS LSVVSQACIG RTSCSIGISN GVFGDPCRHV VKSLAVQAKC SPPPDLSTSA SS

Best Arabidopsis Sequence Match ( AT2G32810.1 )
(BLAST)

001: MAESIRTFSL QWRILSLIIA LLVYFPILSG SYFKPFNVSY DHRALIIAGK RRMLVSAGIH YPRATPEMWS DLIAKSKEGG ADVVQTYVFW NGHEPVKGQY
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF

Arabidopsis Description

BGAL9Beta-galactosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV3]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.