Factsheet for Solyc04g080840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009496	Potato	nucleus, peroxisome, vacuole	70.75	96.12
KRH15132	Soybean	mitochondrion, nucleus	71.29	71.58
KRH05876	Soybean	nucleus	71.02	71.31
Bra036334.1-P	Field mustard	golgi, vacuole	70.61	71.1
CDY47949	Canola	golgi, vacuole	70.34	70.82
CDY53959	Canola	golgi, vacuole	70.34	70.82
KRH61101	Soybean	nucleus	70.61	70.52
AT1G45130.1	Thale cress	golgi, vacuole	70.2	70.49
Bra014036.1-P	Field mustard	plastid	67.89	70.08
CDY36028	Canola	plastid	67.76	69.94
Solyc01g110000.2.1	Tomato	nucleus	67.35	68.09
KRH51779	Soybean	vacuole	64.63	66.62
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	73.74	63.47
Solyc12g008840.1.1	Tomato	extracellular	62.18	63.12
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	70.61	61.42
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	71.16	61.31
Os03t0165400-01	Rice	vacuole	68.44	59.81
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	70.48	59.68
EER92805	Sorghum	vacuole	68.3	59.62
TraesCS4B01G280900.1	Wheat	golgi, vacuole	67.76	58.93
TraesCS4A01G022500.2	Wheat	golgi, vacuole	67.62	58.89
TraesCS4D01G279400.4	Wheat	vacuole	67.76	58.73
HORVU4Hr1G074280.4	Barley	vacuole	67.48	58.56
GSMUA_Achr4P06620_001	Banana	cytosol	50.88	58.07
Zm00001d048440_P003	Maize	vacuole	68.3	57.77
Solyc06g062580.2.1	Tomato	nucleus	64.49	56.36
Solyc03g121540.2.1	Tomato	nucleus	63.13	55.37
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	68.98	55.23
Solyc12g044880.1.1	Tomato	golgi, vacuole	62.72	55.21
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	46.39	49.06
Solyc11g069270.1.1	Tomato	extracellular	53.06	45.77
Solyc03g019890.2.1	Tomato	nucleus	53.61	45.29
Solyc02g078950.2.1	Tomato	vacuole	51.7	45.02
Solyc07g042220.1.1	Tomato	unclear	47.07	42.3
Solyc11g018490.1.1	Tomato	cytosol	43.4	42.25
Solyc09g092160.2.1	Tomato	extracellular	48.98	40.36
Solyc10g055470.1.1	Tomato	vacuole	42.72	37.88
Solyc01g111540.2.1	Tomato	unclear	41.9	37.06

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.40.10	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	InterPro:IPR013783	InterPro:Ig-like_fold
UniProt:K4BVG3	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF51
SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:Solyc04g080840.1	EnsemblPlants:Solyc04g080840.1.1	TMHMM:TMhelix	UniParc:UPI0002765A8F

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:K4BVG3]

Coordinates

chr4:+:64916214..64920400

Molecular Weight (calculated)

82451.9 Da

IEP (calculated)

7.396

GRAVY (calculated)

-0.268

Length

735 amino acids

Sequence
(BLAST)

001: METSLVSKFL KVYIFSLLMV VQLVFCIVTY DKKAIIINGQ RRILLSGSIH YPRSTPEMWQ DLINKAKDAN LDVIETYVFW NVHEPSPGNY NFDGRYDLVR
101: FIKTVQKAGL YAHLRIGPYV CAEWNFGGFP VWLKYVPGIS FRTDNEPFKA AMQKFTNKIV EMMKSENLFE SQGGPIILSQ IENEYQPEKE VLGAAGEAYV
201: QWAAQMAVGL NTGVPWVMCK EDDAPDPIIN TCNGFYCDEF SPNKPYKPTM WTEAWTGWFT EFGSTIPMRP VQDLAFAVAR FIQKGGSFVN YYMFHGGTNF
301: GRTAGGPFIT TSYDYDAPID EYGLIREPKY SHLKEFHRVI KLCESALLSS DPTVVSLGNY QQAHVFLSGK GNCAAFLSNY DSNSAARVVF NNKHYNLPPW
401: SSSILPDCSH VAFNTAKVGA RTSQVRMTPT GSQLHSWGAY NEDVFSLEDS STFEAVGLLE QINITRDNSD YLWYITSVDV SPSESFLRGG QKPTLNIYSN
501: GHAVHVFVNG KLSGSSYGTR KDTKFSFTGP VDLQAGSNTI ELLSIAVGLP NIGLHYEEWN TGILGPVVLQ GLNQGHKDLS SQKWTYRLKE VFQAGLKGET
601: MNLISQHGAS SIEWIGGAVA TQRQQPLKWY KAYFDAPEGN NPVALDMRSM GKGQVWINGQ SIGRYWTATA NGKCDDFHYA GTYRQTKCQL GCGQPTQKWY
701: HVPRSWLKPT QNLFVLFEEI GGDVSRILLV KRTTS

Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)

001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN

Arabidopsis Description

BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.