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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 6
  • extracellular 5
  • vacuole 5
  • plasma membrane 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036334.1-P Field mustard golgi, vacuole 91.67 91.92
CDY53959 Canola golgi, vacuole 91.53 91.78
CDY47949 Canola golgi, vacuole 91.39 91.64
Bra014036.1-P Field mustard plastid 87.02 89.47
CDY36028 Canola plastid 86.75 89.19
KRH15132 Soybean mitochondrion, nucleus 73.77 73.77
KRH05876 Soybean nucleus 73.22 73.22
KRH61101 Soybean nucleus 71.31 70.92
Solyc04g080840.1.1 Tomato extracellular, golgi 70.49 70.2
PGSC0003DMT400009496 Potato nucleus, peroxisome, vacuole 51.64 69.87
KRH51779 Soybean vacuole 64.62 66.34
VIT_18s0001g13230.t01 Wine grape extracellular, golgi 73.22 62.76
GSMUA_Achr4P13580_001 Banana golgi, vacuole 71.86 60.6
GSMUA_Achr9P21610_001 Banana extracellular, golgi 70.49 60.49
EER92805 Sorghum vacuole 69.54 60.45
Os03t0165400-01 Rice vacuole 69.4 60.4
AT5G56870.1 Thale cress vacuole 59.29 59.94
TraesCS4A01G022500.2 Wheat golgi, vacuole 68.31 59.24
AT4G26140.7 Thale cress vacuole 60.93 59.23
TraesCS4B01G280900.1 Wheat golgi, vacuole 68.31 59.17
HORVU4Hr1G074280.4 Barley vacuole 68.44 59.15
TraesCS4D01G279400.4 Wheat vacuole 68.44 59.08
AT4G36360.1 Thale cress endoplasmic reticulum, golgi, vacuole 68.85 58.88
Zm00001d048440_P003 Maize vacuole 69.4 58.46
GSMUA_Achr4P06620_001 Banana cytosol 50.82 57.76
AT3G52840.2 Thale cress golgi, vacuole 60.93 57.11
AT3G13750.1 Thale cress golgi, vacuole 65.57 56.67
Zm00001d027803_P002 Maize golgi, plasma membrane, vacuole 69.4 55.34
AT5G63810.1 Thale cress golgi, vacuole 49.32 48.72
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 54.64 46.95
AT5G63800.1 Thale cress vacuole 44.81 45.68
AT5G20710.1 Thale cress vacuole 49.86 44.19
AT1G31740.1 Thale cress vacuole 46.17 43.39
AT2G32810.1 Thale cress golgi, vacuole 51.78 42.73
AT1G77410.3 Thale cress golgi, vacuole 45.08 40.24
AT2G16730.1 Thale cress extracellular, golgi, vacuole 43.17 37.26
AT4G35010.1 Thale cress vacuole 41.8 36.21
AT4G38590.2 Thale cress golgi, vacuole 40.71 28.33
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80EntrezGene:841080ProteinID:AAF69162.1ProteinID:AEE32082.1EMBL:AJ270301
ArrayExpress:AT1G45130EnsemblPlantsGene:AT1G45130RefSeq:AT1G45130TAIR:AT1G45130RefSeq:AT1G45130-TAIR-GEnsemblPlants:AT1G45130.1
TAIR:AT1G45130.1EMBL:AY058098EMBL:AY069911EMBL:AY093977Unigene:At.24850Symbol:BGAL5
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005575
GO:GO:0005576GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0016787GO:GO:0016798
GO:GO:0030312GO:GO:0048046InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SFInterPro:IPR008979RefSeq:NP_175127.1PFAM:PF01301PO:PO:0000003PO:PO:0000013
PO:PO:0000014PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF51UniProt:Q9MAJ7
SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000AA728:
Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
Coordinates
chr1:+:17065111..17069269
Molecular Weight (calculated)
81447.8 Da
IEP (calculated)
8.367
GRAVY (calculated)
-0.253
Length
732 amino acids
Sequence
(BLAST)
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.