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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH51779 Soybean vacuole 88.04 90.88
KRH15132 Soybean mitochondrion, nucleus 82.88 83.33
KRH05876 Soybean nucleus 82.47 82.92
PGSC0003DMT400009496 Potato nucleus, peroxisome, vacuole 52.85 71.9
CDY47949 Canola golgi, vacuole 70.92 71.51
CDY53959 Canola golgi, vacuole 70.92 71.51
Bra036334.1-P Field mustard golgi, vacuole 70.79 71.37
AT1G45130.1 Thale cress golgi, vacuole 70.92 71.31
Solyc04g080840.1.1 Tomato extracellular, golgi 70.52 70.61
Bra014036.1-P Field mustard plastid 67.53 69.8
CDY36028 Canola plastid 67.53 69.8
VIT_18s0001g13230.t01 Wine grape extracellular, golgi 76.22 65.69
KRH76716 Soybean nucleus 74.05 64.19
KRH69834 Soybean extracellular, golgi 73.37 63.68
KRH28740 Soybean nucleus 73.37 63.31
KRH08131 Soybean nucleus 72.55 62.97
GSMUA_Achr9P21610_001 Banana extracellular, golgi 72.55 62.6
KRH37385 Soybean nucleus 60.73 62.0
KRH12385 Soybean vacuole 60.6 61.86
EER92805 Sorghum vacuole 70.65 61.76
GSMUA_Achr4P13580_001 Banana golgi, vacuole 72.28 61.29
Os03t0165400-01 Rice vacuole 69.43 60.76
Zm00001d048440_P003 Maize vacuole 71.2 60.3
HORVU4Hr1G074280.4 Barley vacuole 69.02 59.98
TraesCS4A01G022500.2 Wheat golgi, vacuole 68.75 59.95
TraesCS4B01G280900.1 Wheat golgi, vacuole 68.75 59.88
TraesCS4D01G279400.4 Wheat vacuole 68.48 59.43
GSMUA_Achr4P06620_001 Banana cytosol 51.36 58.7
Zm00001d027803_P002 Maize golgi, plasma membrane, vacuole 70.92 56.86
KRH10007 Soybean nucleus 64.81 56.79
KRH47126 Soybean nucleus 64.95 56.57
KRH44153 Soybean nucleus 64.54 56.35
KRH23324 Soybean vacuole 64.13 56.12
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 61.14 53.64
KRH02714 Soybean golgi, vacuole 60.6 53.16
KRH64633 Soybean vacuole 46.74 49.43
KRH40964 Soybean golgi, vacuole 47.01 49.15
KRH53267 Soybean golgi, vacuole 46.33 48.92
KRH22910 Soybean nucleus 55.16 48.33
KRH26431 Soybean golgi, vacuole 54.48 47.74
KRH53958 Soybean golgi, vacuole 46.47 47.7
KRH63978 Soybean golgi, vacuole 46.33 47.56
KRH29942 Soybean extracellular, golgi, vacuole 53.94 47.37
KRG89008 Soybean nucleus 53.4 47.01
KRH63980 Soybean vacuole 53.12 46.38
KRH53957 Soybean nucleus 52.85 46.04
KRH19351 Soybean extracellular, golgi, vacuole 48.23 42.93
KRH70131 Soybean vacuole 48.51 42.75
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 48.1 42.55
KRH02579 Soybean extracellular, golgi, vacuole 48.78 42.54
KRH07365 Soybean extracellular, golgi, vacuole 47.42 42.25
KRH42784 Soybean nucleus 50.0 40.48
KRH48710 Soybean vacuole 45.65 39.72
KRH48708 Soybean vacuole 45.52 39.6
KRH60700 Soybean extracellular, golgi, vacuole 44.97 39.22
KRH24309 Soybean golgi, vacuole 44.02 38.43
KRH38266 Soybean cytosol, peroxisome 30.03 37.78
KRH29286 Soybean extracellular, golgi, vacuole 42.93 37.53
KRH06832 Soybean mitochondrion 38.18 37.47
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23EntrezGene:100795144
Gene3D:2.60.120.260MapMan:21.3.2.2.2Gene3D:3.20.20.80EMBL:ACUP02002155EnsemblPlantsGene:GLYMA_04G028600GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005575GO:GO:0005618GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787GO:GO:0016798GO:GO:0030312InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFUniProt:I1JT76InterPro:IPR008979EnsemblPlants:KRH61101ProteinID:KRH61101
ProteinID:KRH61101.1PFAM:PF01301PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF51
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0002339AFASEG:seg
Description
hypothetical protein
Coordinates
chr4:-:2318784..2324254
Molecular Weight (calculated)
82068.4 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.283
Length
736 amino acids
Sequence
(BLAST)
001: MDTIANSVSK LLTLFLTVLF VGSELTHCNV TYDRKSLLIN GQRRILISGS IHYPRSTPEM WEDLIWKAKH GGLDVIDTYV FWDVHEPSPG NYDFEGRYDL
101: VRFIKTVQKV GLYANLRIGP YVCAEWNFGG IPVWLKYVPG VSFRTDNEPF KAAMQGFTQK IVQMMKSEKL FQSQGGPIIL SQIENEYGPE SRGAAGRAYV
201: NWAASMAVGL GTGVPWVMCK ENDAPDPVIN SCNGFYCDDF SPNKPYKPSM WTETWSGWFT EFGGPIHQRP VEDLSFAVAR FIQKGGSYVN YYMYHGGTNF
301: GRSAGGPFIT TSYDYDAPID EYGLIRQPKY SHLKELHKAI KRCEHALVSL DPTVLSLGTL LQAHVFSSGT GTCAAFLANY NAQSAATVTF NNRHYDLPPW
401: SISILPDCKI DVFNTAKVRV QPSQVKMLPV KPKLFSWESY DEDLSSLAES SRITAPGLLE QLNVTRDTSD YLWYITSVDI SSSESFLRGG QKPSINVQSA
501: GHAVHVFVNG QFSGSAFGTR EQRSCTYNGP VDLRAGANKI ALLSVTVGLQ NVGRHYETWE AGITGPVLLH GLDQGQKDLT WNKWSYKVGL RGEAMNLVSP
601: NGVSSVDWVQ ESQATQSRSQ LKWYKAYFDA PGGKEPLALD LESMGKGQVW INGQSIGRYW MAYAKGDCNS CTYSGTFRPV KCQLGCGQPT QRWYHVPRSW
701: LKPTKNLIVV FEELGGNPWK ISLVKRVAHT PAVHGQ
Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.