Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23324 | Soybean | vacuole | 97.62 | 97.5 |
| KRH47126 | Soybean | nucleus | 87.62 | 87.1 |
| KRH44153 | Soybean | nucleus | 87.02 | 86.71 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 81.31 | 81.21 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 79.64 | 79.74 |
| CDX97513 | Canola | golgi, vacuole | 79.64 | 79.64 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 80.24 | 79.58 |
| CDY23637 | Canola | golgi, vacuole | 79.29 | 79.38 |
| CDY51738 | Canola | golgi, vacuole | 79.05 | 79.14 |
| PGSC0003DMT400083896 | Potato | extracellular | 78.33 | 78.8 |
| Solyc03g121540.2.1 | Tomato | nucleus | 78.57 | 78.76 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 78.45 | 78.64 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 77.98 | 78.44 |
| CDY37486 | Canola | golgi, vacuole | 78.21 | 78.31 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 77.98 | 77.98 |
| Solyc06g062580.2.1 | Tomato | nucleus | 77.74 | 77.65 |
| Bra021506.1-P | Field mustard | vacuole | 78.93 | 77.0 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 64.29 | 73.97 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 63.69 | 72.89 |
| KRH12385 | Soybean | vacuole | 62.02 | 72.26 |
| KRH37385 | Soybean | nucleus | 61.9 | 72.12 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 71.9 | 71.99 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 62.98 | 71.88 |
| KRH02714 | Soybean | golgi, vacuole | 71.67 | 71.75 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 62.74 | 71.6 |
| GSMUA_Achr6P35850_001 | Banana | golgi, vacuole | 70.0 | 71.36 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 62.02 | 71.17 |
| Os01t0580200-01 | Rice | golgi, vacuole | 69.52 | 70.62 |
| OQU87043 | Sorghum | golgi, vacuole | 69.29 | 70.37 |
| Zm00001d044290_P005 | Maize | golgi, vacuole | 68.81 | 69.64 |
| HORVU3Hr1G050450.12 | Barley | golgi, vacuole | 68.21 | 68.95 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 68.45 | 68.86 |
| TraesCS3A01G208600.1 | Wheat | plastid | 68.33 | 68.74 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 68.45 | 68.7 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 57.62 | 67.41 |
| TraesCS7D01G359500.1 | Wheat | golgi | 57.5 | 67.36 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 40.0 | 67.2 |
| EER88554 | Sorghum | golgi, vacuole | 57.98 | 67.17 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 57.14 | 67.13 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 57.38 | 67.13 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 57.62 | 66.85 |
| Zm00001d046357_P001 | Maize | extracellular | 57.38 | 66.76 |
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 57.26 | 66.34 |
| KRH15132 | Soybean | mitochondrion, nucleus | 57.5 | 65.98 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 56.9 | 65.93 |
| KRH76716 | Soybean | nucleus | 66.31 | 65.61 |
| EES06516 | Sorghum | mitochondrion, plastid | 57.74 | 65.54 |
| KRH05876 | Soybean | nucleus | 57.02 | 65.44 |
| KRH28740 | Soybean | nucleus | 66.43 | 65.42 |
| KRH61101 | Soybean | nucleus | 56.79 | 64.81 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 57.62 | 64.79 |
| KRH08131 | Soybean | nucleus | 64.76 | 64.15 |
| KRH69834 | Soybean | extracellular, golgi | 64.4 | 63.8 |
| HORVU6Hr1G039490.6 | Barley | plastid | 57.86 | 63.61 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 62.62 | 62.54 |
| KRH51779 | Soybean | vacuole | 51.55 | 60.73 |
| Zm00001d053585_P002 | Maize | plastid | 56.9 | 57.66 |
| KRH22910 | Soybean | nucleus | 57.14 | 57.14 |
| KRH26431 | Soybean | golgi, vacuole | 56.19 | 56.19 |
| KRG89008 | Soybean | nucleus | 55.24 | 55.5 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 55.12 | 55.25 |
| KRH63980 | Soybean | vacuole | 52.74 | 52.55 |
| KRH53957 | Soybean | nucleus | 52.26 | 51.95 |
| KRH64633 | Soybean | vacuole | 41.67 | 50.29 |
| KRH53267 | Soybean | golgi, vacuole | 41.55 | 50.07 |
| KRH40964 | Soybean | golgi, vacuole | 41.55 | 49.57 |
| KRH63978 | Soybean | golgi, vacuole | 42.02 | 49.23 |
| KRH70131 | Soybean | vacuole | 48.69 | 48.98 |
| KRH53958 | Soybean | golgi, vacuole | 41.79 | 48.95 |
| KRH38264 | Soybean | endoplasmic reticulum, golgi, vacuole | 48.21 | 48.68 |
| KRH19351 | Soybean | extracellular, golgi, vacuole | 47.86 | 48.61 |
| KRH42784 | Soybean | nucleus | 52.02 | 48.07 |
| KRH02579 | Soybean | extracellular, golgi, vacuole | 48.21 | 47.99 |
| KRH07365 | Soybean | extracellular, golgi, vacuole | 46.19 | 46.97 |
| KRH48708 | Soybean | vacuole | 46.67 | 46.34 |
| KRH48710 | Soybean | vacuole | 46.55 | 46.22 |
| KRH60700 | Soybean | extracellular, golgi, vacuole | 44.52 | 44.31 |
| KRH38266 | Soybean | cytosol, peroxisome | 30.24 | 43.42 |
| KRH24309 | Soybean | golgi, vacuole | 43.21 | 43.06 |
| KRH06832 | Soybean | mitochondrion | 38.33 | 42.93 |
| KRH29286 | Soybean | extracellular, golgi, vacuole | 42.74 | 42.64 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | EntrezGene:100811187 |
| Gene3D:2.60.120.260 | Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EMBL:ACUP02009116 | EnsemblPlantsGene:GLYMA_15G023800 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | UniProt:I1MCY9 |
| InterPro:IPR000922 | InterPro:IPR008979 | EnsemblPlants:KRH10007 | ProteinID:KRH10007 | ProteinID:KRH10007.1 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF74 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000233B748 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:1904675..1911260
Molecular Weight (calculated)
93261.9 Da
IEP (calculated)
7.478
GRAVY (calculated)
-0.245
Length
840 amino acids
Sequence
(BLAST)
(BLAST)
001: MVICLKLIIM WNVALLLVFS LIGSAKASVS YDSKAITING QRRILISGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGK YYFEGNYDLV
101: KFIKLVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYIPGI SFRTDNEPFK HQMQKFTTKI VDLMKAERLY ESQGGPIIMS QIENEYGPME YEIGAAGKAY
201: TKWAAEMAMG LGTGVPWVMC KQDDTPDPLI NTCNGFYCDY FSPNKAYKPK MWTEAWTGWF TEFGGPVPHR PAEDLAFSVA RFIQKGGSFI NYYMYHGGTN
301: FGRTAGGPFI ATSYDYDAPL DEYGLLRQPK WGHLKDLHRA IKLCEPALVS GDPTVTKIGN YQEAHVFKSK SGACAAFLAN YNPKSYATVA FGNMHYNLPP
401: WSISILPDCK NTVYNTARVG SQSAQMKMTR VPIHGGFSWL SFNEETTTTD DSSFTMTGLL EQLNTTRDLS DYLWYSTDVV LDPNEGFLRN GKDPVLTVFS
501: AGHALHVFIN GQLSGTAYGS LEFPKLTFNE GVKLRAGVNK ISLLSVAVGL PNVGPHFETW NAGVLGPISL SGLNEGRRDL SWQKWSYKVG LKGEILSLHS
601: LSGSSSVEWI QGSLVSQRQP LTWYKTTFDA PAGTAPLALD MDSMGKGQVW LNGQNLGRYW PAYKASGTCD YCDYAGTYNE NKCRSNCGEA SQRWYHVPQS
701: WLKPTGNLLV VFEELGGDPN GIFLVRRDID SVCADIYEWQ PNLISYQMQT SGKAPVRPKV HLSCSPGQKI SSIKFASFGT PAGSCGNFHE GSCHAHKSYD
801: AFERNCVGQN WCTVTVSPEN FGGDPCPNVL KKLSVEAICS
101: KFIKLVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYIPGI SFRTDNEPFK HQMQKFTTKI VDLMKAERLY ESQGGPIIMS QIENEYGPME YEIGAAGKAY
201: TKWAAEMAMG LGTGVPWVMC KQDDTPDPLI NTCNGFYCDY FSPNKAYKPK MWTEAWTGWF TEFGGPVPHR PAEDLAFSVA RFIQKGGSFI NYYMYHGGTN
301: FGRTAGGPFI ATSYDYDAPL DEYGLLRQPK WGHLKDLHRA IKLCEPALVS GDPTVTKIGN YQEAHVFKSK SGACAAFLAN YNPKSYATVA FGNMHYNLPP
401: WSISILPDCK NTVYNTARVG SQSAQMKMTR VPIHGGFSWL SFNEETTTTD DSSFTMTGLL EQLNTTRDLS DYLWYSTDVV LDPNEGFLRN GKDPVLTVFS
501: AGHALHVFIN GQLSGTAYGS LEFPKLTFNE GVKLRAGVNK ISLLSVAVGL PNVGPHFETW NAGVLGPISL SGLNEGRRDL SWQKWSYKVG LKGEILSLHS
601: LSGSSSVEWI QGSLVSQRQP LTWYKTTFDA PAGTAPLALD MDSMGKGQVW LNGQNLGRYW PAYKASGTCD YCDYAGTYNE NKCRSNCGEA SQRWYHVPQS
701: WLKPTGNLLV VFEELGGDPN GIFLVRRDID SVCADIYEWQ PNLISYQMQT SGKAPVRPKV HLSCSPGQKI SSIKFASFGT PAGSCGNFHE GSCHAHKSYD
801: AFERNCVGQN WCTVTVSPEN FGGDPCPNVL KKLSVEAICS
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.