Factsheet for Os01t0580200-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87043	Sorghum	golgi, vacuole	92.14	92.14
Zm00001d044290_P005	Maize	golgi, vacuole	91.66	91.33
HORVU3Hr1G050450.12	Barley	golgi, vacuole	90.33	89.89
TraesCS3A01G208600.1	Wheat	plastid	89.84	88.98
TraesCS3D01G211500.2	Wheat	golgi, vacuole	89.6	88.74
TraesCS3B01G235100.1	Wheat	golgi, vacuole	89.24	88.17
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	77.39	77.67
CDX88594	Canola	golgi, vacuole	27.93	71.08
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	57.07	70.45
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	70.98	69.8
Os06t0573600-01	Rice	plasma membrane, vacuole	60.22	69.65
PGSC0003DMT400083896	Potato	extracellular	70.25	69.58
KRH10007	Soybean	nucleus	70.62	69.52
Solyc03g121540.2.1	Tomato	nucleus	70.37	69.45
Solyc12g044880.1.1	Tomato	golgi, vacuole	69.89	69.22
PGSC0003DMT400006654	Potato	golgi, vacuole	70.01	69.09
KRH23324	Soybean	vacuole	70.25	69.08
KRH44153	Soybean	nucleus	70.37	69.04
Solyc12g008840.1.1	Tomato	extracellular	60.22	68.78
KRH47126	Soybean	nucleus	70.25	68.76
Solyc06g062580.2.1	Tomato	nucleus	69.53	68.37
KRH37385	Soybean	nucleus	59.49	68.24
PGSC0003DMT400012359	Potato	golgi, vacuole	69.29	68.21
Bra027403.1-P	Field mustard	golgi, vacuole	69.04	68.06
CDX97513	Canola	golgi, vacuole	69.04	67.98
CDX76255	Canola	extracellular	10.52	67.97
KRH12385	Soybean	vacuole	59.13	67.82
CDY51738	Canola	golgi, vacuole	68.68	67.7
CDY23637	Canola	golgi, vacuole	68.56	67.58
AT3G13750.1	Thale cress	golgi, vacuole	69.17	67.53
CDY37486	Canola	golgi, vacuole	68.2	67.22
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	67.71	66.75
KRH02714	Soybean	golgi, vacuole	67.35	66.39
CDX94367	Canola	mitochondrion	57.07	66.29
VIT_11s0016g02200.t01	Wine grape	vacuole	66.99	66.27
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	35.79	66.22
Bra021506.1-P	Field mustard	vacuole	68.56	65.85
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	56.35	65.45
Os02t0219200-01	Rice	peroxisome, vacuole	39.54	65.4
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	57.07	64.48
Os03t0165400-01	Rice	vacuole	65.42	64.33
CDX95380	Canola	vacuole	56.47	64.24
AT5G56870.1	Thale cress	vacuole	56.11	64.09
CDY11899	Canola	golgi, vacuole	55.86	63.99
Bra006850.1-P	Field mustard	golgi, vacuole	55.74	63.85
AT4G26140.7	Thale cress	vacuole	57.8	63.48
CDY42755	Canola	vacuole	54.53	63.34
CDX92753	Canola	golgi, vacuole	54.53	63.34
Bra019120.1-P	Field mustard	golgi, vacuole	54.41	63.2
CDX76254	Canola	golgi, nucleus, vacuole	44.86	63.1
CDX89360	Canola	mitochondrion	53.33	63.09
Bra035634.1-P	Field mustard	golgi, vacuole	55.02	63.02
CDY20708	Canola	golgi, vacuole	54.9	62.88
CDY32919	Canola	golgi, vacuole	54.9	62.88
AT3G52840.2	Thale cress	golgi, vacuole	56.83	60.18
CDY70594	Canola	cytosol	29.5	58.65
CDY69471	Canola	cytosol	29.38	58.41
Os06t0628500-00	Rice	extracellular, golgi, vacuole	18.14	51.02
Os03t0255100-01	Rice	extracellular	54.29	46.97
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	51.63	46.46
Os12t0429200-01	Rice	plasma membrane	50.91	45.81
Os05t0428100-00	Rice	golgi, vacuole	44.5	45.38
Os10t0340600-01	Rice	extracellular, golgi, vacuole	44.01	43.96
Os09t0539200-01	Rice	vacuole	23.46	43.5
Os10t0330600-01	Rice	extracellular	43.41	43.36
Os08t0549200-01	Rice	plasma membrane	43.53	42.45

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4324191	EMBL:AK103045	ProteinID:BAB84455.1
ProteinID:BAF05319.1	ProteinID:BAS72858.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0048046	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
EnsemblPlantsGene:Os01g0580200	EnsemblPlants:Os01t0580200-01	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	UniProt:Q8W0A1	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A33FF	RefSeq:XP_015621619.1	SEG:seg	:

Description

BETA-GALACTOSIDASE 3Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os01t0580200-01)

Coordinates

chr1:+:22466601..22472572

Molecular Weight (calculated)

91553.2 Da

IEP (calculated)

5.729

GRAVY (calculated)

-0.267

Length

827 amino acids

Sequence
(BLAST)

001: MAASAVAVAF VVAVAAVLAA AASAAVTYDR KAVVVNGQRR ILISGSIHYP RSTPEMWPDL IEKAKDGGLD VVQTYVFWNG HEPSPGQYYF EGRYDLVHFI
101: KLVKQAGLYV NLRIGPYVCA EWNFGGFPVW LKYVPGISFR TDNEPFKAEM QKFTTKIVEM MKSEGLFEWQ GGPIILSQIE NEFGPLEWDQ GEPAKAYASW
201: AANMAVALNT SVPWIMCKED DAPDPIINTC NGFYCDWFSP NKPHKPTMWT EAWTAWYTGF GIPVPHRPVE DLAYGVAKFI QKGGSFVNYY MYHGGTNFGR
301: TAGGPFIATS YDYDAPIDEY GLLREPKWGH LKQLHKAIKL CEPALVAGDP IVTSLGNAQK SSVFRSSTGA CAAFLENKDK VSYARVAFNG MHYDLPPWSI
401: SILPDCKTTV FNTARVGSQI SQMKMEWAGG FAWQSYNEEI NSFGEDPLTT VGLLEQINVT RDNTDYLWYT TYVDVAQDEQ FLSNGENLKL TVMSAGHALH
501: IFINGQLKGT VYGSVDDPKL TYTGNVKLWA GSNTISCLSI AVGLPNVGEH FETWNAGILG PVTLDGLNEG RRDLTWQKWT YQVGLKGESM SLHSLSGSST
601: VEWGEPVQKQ PLTWYKAFFN APDGDEPLAL DMSSMGKGQI WINGQGIGRY WPGYKASGNC GTCDYRGEYD ETKCQTNCGD SSQRWYHVPR SWLSPTGNLL
701: VIFEEWGGDP TGISMVKRSI GSVCADVSEW QPSMKNWHTK DYEKAKVHLQ CDNGQKITEI KFASFGTPQG SCGSYTEGGC HAHKSYDIFW KNCVGQERCG
801: VSVVPEIFGG DPCPGTMKRA VVEAICG

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.