CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76255	Canola	extracellular	34.15	86.72
CDX98327	Canola	golgi, vacuole	47.69	61.75
CDY11899	Canola	golgi, vacuole	98.77	44.46
CDY32919	Canola	golgi, vacuole	95.08	42.8
AT5G56870.1	Thale cress	vacuole	94.77	42.54
CDY20708	Canola	golgi, vacuole	93.85	42.24
CDX92753	Canola	golgi, vacuole	83.08	37.92
CDY42755	Canola	vacuole	82.77	37.78
CDX94367	Canola	mitochondrion	81.85	37.36
CDX95380	Canola	vacuole	83.08	37.14
CDY70160	Canola	vacuole	60.92	36.33
KRH12385	Soybean	vacuole	77.23	34.81
KRH37385	Soybean	nucleus	76.62	34.54
Solyc12g008840.1.1	Tomato	extracellular	75.08	33.7
CDX89360	Canola	mitochondrion	69.85	32.48
GSMUA_Achr7P08970_001	Banana	vacuole	72.31	32.19
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	72.62	32.15
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	72.31	31.93
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	70.46	31.89
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	65.54	31.79
Zm00001d046357_P001	Maize	extracellular	70.46	31.72
TraesCS7D01G359500.1	Wheat	golgi	69.85	31.66
Os06t0573600-01	Rice	plasma membrane, vacuole	69.23	31.47
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	71.08	31.39
GSMUA_Achr7P08940_001	Banana	vacuole	70.46	31.28
EER88554	Sorghum	golgi, vacuole	69.54	31.17
TraesCS6A01G185400.1	Wheat	golgi, vacuole	69.23	31.08
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	68.62	31.06
TraesCS6D01G172400.1	Wheat	golgi, vacuole	69.23	31.03
TraesCS6B01G214100.1	Wheat	golgi, vacuole	68.92	30.9
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	70.77	30.79
KRH02714	Soybean	golgi, vacuole	78.77	30.51
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	78.77	30.51
EES06516	Sorghum	mitochondrion, plastid	68.92	30.27
CDY36028	Canola	plastid	64.92	29.63
CDY53959	Canola	golgi, vacuole	66.15	29.45
CDY47949	Canola	golgi, vacuole	66.15	29.45
HORVU6Hr1G039490.6	Barley	plastid	68.92	29.32
VIT_11s0016g02200.t01	Wine grape	vacuole	73.23	28.47
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	71.08	28.03
CDX97513	Canola	golgi, vacuole	72.31	27.98
Os01t0580200-01	Rice	golgi, vacuole	71.08	27.93
CDY23637	Canola	golgi, vacuole	72.0	27.89
GSMUA_Achr2P16780_001	Banana	plastid	72.0	27.82
CDY51738	Canola	golgi, vacuole	71.69	27.77
OQU87043	Sorghum	golgi, vacuole	70.15	27.57
CDY37486	Canola	golgi, vacuole	71.08	27.53
HORVU3Hr1G050450.12	Barley	golgi, vacuole	70.15	27.44
TraesCS3A01G208600.1	Wheat	plastid	70.46	27.43
TraesCS3D01G211500.2	Wheat	golgi, vacuole	70.15	27.31
TraesCS3B01G235100.1	Wheat	golgi, vacuole	70.15	27.24
Zm00001d044290_P005	Maize	golgi, vacuole	69.54	27.23
CDY39845	Canola	vacuole	59.38	26.81
Zm00001d053585_P002	Maize	plastid	68.0	26.66
CDX67763	Canola	golgi, plasma membrane, vacuole	61.85	26.07
CDY31349	Canola	vacuole	59.08	25.91
CDY43757	Canola	golgi, vacuole	58.77	25.78
CDX75569	Canola	golgi, vacuole	65.54	25.76
CDY15749	Canola	golgi, vacuole	66.77	25.71
CDX76254	Canola	golgi, nucleus, vacuole	46.46	25.68
CDY28339	Canola	vacuole	62.15	25.63
CDY34975	Canola	golgi, plasma membrane, vacuole	62.15	25.63
CDX69219	Canola	vacuole	64.92	25.61
CDX84446	Canola	golgi, vacuole	58.15	25.51
CDX84445	Canola	vacuole	56.31	25.42
CDY04567	Canola	golgi, vacuole	66.15	25.29
CDY31204	Canola	golgi, vacuole	65.23	25.12
CDY59693	Canola	vacuole	65.85	25.0
CDX93659	Canola	vacuole	62.77	24.94
CDX83288	Canola	golgi, vacuole	64.31	24.73
CDY65885	Canola	vacuole	61.85	24.48
CDX67790	Canola	vacuole	60.62	24.17
CDY23785	Canola	vacuole	62.46	22.73
CDY19166	Canola	golgi, vacuole	61.85	22.64
CDY32304	Canola	cytosol	58.46	21.54
CDX75479	Canola	vacuole	52.92	20.36
CDX69103	Canola	vacuole	52.62	20.26
CDY40650	Canola	vacuole	51.38	19.79
CDX72512	Canola	vacuole	51.08	19.67
CDY53917	Canola	plastid	60.92	19.24
CDX72747	Canola	vacuole	52.31	19.19
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	45.23	18.85
CDY22419	Canola	cytosol	52.31	17.78
CDY02241	Canola	golgi, vacuole	51.69	16.99
Os02t0219200-01	Rice	peroxisome, vacuole	24.0	15.6
CDX89744	Canola	vacuole	51.69	15.47
CDY43756	Canola	cytosol, nucleus, peroxisome	21.85	13.92
CDY69031	Canola	cytosol, plastid, vacuole	25.23	13.2
CDY70118	Canola	cytosol	15.08	8.25
CDY70594	Canola	cytosol	5.54	4.33
CDY69471	Canola	cytosol	5.54	4.33
CDY59725	Canola	cytosol	0.92	0.96
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	0.31	0.22
CDY59691	Canola	cytosol, nucleus, vacuole	0.0	0.0

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	MapMan:21.3.2.2.2
Gene3D:3.20.20.80	GO:A0A078DJ57	EnsemblPlants:CDX88594	ProteinID:CDX88594	ProteinID:CDX88594.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00148629001	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	PFAM:PF01301
PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF63	MetaCyc:PWY-6807	SUPFAM:SSF51445
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EDF4FE	:	:	:

Description

BnaA03g10550D

Coordinates

chrLK031856:+:88670..90852

Molecular Weight (calculated)

36994.1 Da

IEP (calculated)

6.900

GRAVY (calculated)

-0.277

Length

325 amino acids

Sequence
(BLAST)

001: MGSNFRDKAW IFLAILCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPSPII DTCNGYYCEN FKPNSNNKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFIQNGGSFV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGNN

Best Arabidopsis Sequence Match ( AT4G26140.4 )
(BLAST)

001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGNIKIGQT HPHGSLPLSS VKHFFVSGTA YGSLEKPKLT FSQKIKLHAG VNKLALLSTA AGLPVSSPQF ISALFSHTLI TF

Arabidopsis Description

BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.