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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • nucleus 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:vacuole
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011946.1-P Field mustard golgi, vacuole 97.88 98.46
CDY15749 Canola golgi, vacuole 95.76 96.45
CDY31204 Canola golgi, vacuole 88.71 89.34
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 88.94 88.73
CDX83288 Canola golgi, vacuole 88.0 88.52
KRH22910 Soybean nucleus 72.94 73.81
KRH29942 Soybean extracellular, golgi, vacuole 72.12 73.15
KRH26431 Soybean golgi, vacuole 71.53 72.38
KRG89008 Soybean nucleus 70.94 72.13
VIT_06s0004g03020.t01 Wine grape extracellular 71.53 71.87
PGSC0003DMT400020941 Potato extracellular 68.71 68.54
GSMUA_Achr4P20830_001 Banana golgi, vacuole 70.0 68.31
Solyc11g069270.1.1 Tomato extracellular 68.12 67.96
EER92534 Sorghum endoplasmic reticulum, golgi 67.18 66.4
CDX88594 Canola golgi, vacuole 25.29 66.15
GSMUA_Achr4P22060_001 Banana golgi, vacuole 65.29 66.07
TraesCS4A01G083700.3 Wheat extracellular 65.76 65.53
TraesCS4B01G220500.1 Wheat golgi 65.29 65.06
HORVU0Hr1G008780.10 Barley plasma membrane, vacuole 65.76 64.33
Zm00001d028474_P002 Maize vacuole 67.88 64.25
TraesCS4D01G220800.2 Wheat vacuole 65.29 64.01
CDX98327 Canola golgi, vacuole 18.82 63.74
Os03t0255100-01 Rice extracellular 66.82 59.41
CDX76255 Canola extracellular 8.82 58.59
CDX94367 Canola mitochondrion 46.94 56.04
CDY51738 Canola golgi, vacuole 54.24 54.95
CDX95380 Canola vacuole 46.82 54.75
CDY53959 Canola golgi, vacuole 46.94 54.66
CDX97513 Canola golgi, vacuole 54.0 54.64
CDX92753 Canola golgi, vacuole 45.76 54.63
CDY36028 Canola plastid 45.76 54.63
CDY47949 Canola golgi, vacuole 46.82 54.52
CDX75569 Canola golgi, vacuole 52.94 54.41
CDY23637 Canola golgi, vacuole 53.65 54.35
CDX69219 Canola vacuole 52.59 54.25
CDY37486 Canola golgi, vacuole 53.53 54.23
CDY11899 Canola golgi, vacuole 46.0 54.16
CDY42755 Canola vacuole 45.18 53.93
CDX76254 Canola golgi, nucleus, vacuole 37.29 53.91
CDY59693 Canola vacuole 53.88 53.5
CDY32919 Canola golgi, vacuole 44.94 52.91
CDX89360 Canola mitochondrion 43.41 52.79
CDY20708 Canola golgi, vacuole 44.82 52.77
CDY70160 Canola vacuole 33.53 52.29
CDY23785 Canola vacuole 54.12 51.51
CDY43757 Canola golgi, vacuole 44.71 51.28
CDY19166 Canola golgi, vacuole 53.29 51.01
CDX67790 Canola vacuole 48.71 50.8
CDX84446 Canola golgi, vacuole 44.24 50.74
CDY34975 Canola golgi, plasma membrane, vacuole 46.94 50.63
CDY28339 Canola vacuole 46.82 50.51
CDX93659 Canola vacuole 48.24 50.12
CDY65885 Canola vacuole 48.35 50.06
CDY39845 Canola vacuole 40.59 47.92
CDY69031 Canola cytosol, plastid, vacuole 34.71 47.5
CDX84445 Canola vacuole 40.24 47.5
CDY31349 Canola vacuole 40.24 46.15
CDY69471 Canola cytosol 22.24 45.43
CDY70594 Canola cytosol 22.24 45.43
CDY32304 Canola cytosol 46.35 44.67
CDY59691 Canola cytosol, nucleus, vacuole 17.88 43.18
CDY43756 Canola cytosol, nucleus, peroxisome 25.88 43.14
CDY59725 Canola cytosol 15.53 42.31
CDX75479 Canola vacuole 40.35 40.59
CDY40650 Canola vacuole 40.24 40.52
CDX69103 Canola vacuole 40.24 40.52
CDX72512 Canola vacuole 40.12 40.4
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 36.59 39.87
CDX72747 Canola vacuole 40.35 38.71
CDY53917 Canola plastid 46.82 38.68
CDX67763 Canola golgi, plasma membrane, vacuole 32.94 36.32
CDY22419 Canola cytosol 40.47 35.98
CDY70118 Canola cytosol 24.24 34.68
CDY02241 Canola golgi, vacuole 39.29 33.77
CDX89744 Canola vacuole 38.82 30.39
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078EUD0EnsemblPlants:CDY04567ProteinID:CDY04567
ProteinID:CDY04567.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00118755001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979
InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228
PANTHER:PTHR23421PANTHER:PTHR23421:SF74MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445TMHMM:TMhelix
UniParc:UPI0004EDBB5BSEG:seg::::
Description
BnaA07g13930D
Coordinates
chrLK031955:-:794453..799388
Molecular Weight (calculated)
92505.8 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.205
Length
850 amino acids
Sequence
(BLAST)
001: MVIAAKMVRG KKVEIVSLLI LVIVMAATAA TVTYDHRALV IDGKRKILIS GSIHYPRSTP EMWPDLIQKS KVGGLDVIET YVFWNGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYACAEWNY GGFPVWLHFV PGIKFRTDNE PFKAEMQRFT AKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAG
201: KSYMKWSASM ALSLDTGVPW NMCQQGDAPD PIINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGEPT PYRPVEDLAF AVARFFQRGG TFQNYYMYHG
301: GTNFERTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPEITS LGSNLEAAVY KTSSGSCAAF LANIGTQSDA TVTFNGKSYR
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SHIKEPIGIS KADALVKPGL LEQINTTADK SDYLWYSLRM DIKGDETFLD
501: EGSKAILHIQ SIGQVVYAFI NGKLAGSGND RTNISLDIPI NLVNGKNTID LLSVTVGLAN YGAFFDIIGA GITGPVSLNS AKTGSSMDLS SQQWTYQVGL
601: KGEDTGLGSG DSSEWVSNSP LPTNQPLVWY KTTFNAPSGS DPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI ARADGCVGSC DYRGTYRNDK CLKNCGKPSQ
701: TLYHVPRSWI KPSGNTLVLL EEMGGDPTKI SFATKHTGSN LCLKVSESHP APVDTWTSDS KFSNRTSPVL SLKCPVSTQV ISSIRFASFG TPTGTCGSFN
801: HGRCSSARSL SVVQKACVGS RSCKVEVSTR VFGEPCHGVV KSLAVEAVCA
Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.